Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 39 Aligned Residues 285 % Identity 14% Template c3v7nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine synthase; PDBTitle: crystal structure of threonine synthase (thrc) from from burkholderia2 thailandensis Resolution 1.40 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.															.																		.
Query SS confidence																																														.	.	.															.																		.
Query Sequence		A	P	V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	.	.	.	Y	A	M	M	A	G	L	T	E	E	Q	K	A	H	.	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	.
Query Conservation																																														.	.	.															.																		.
Alig confidence														.	.	.																														.	.	.															.																		.
Template Conservation														.	.	.
Template Sequence		R	R	G	G	N	A	A	D	I	T	P	L	.	.	.	T	T	L	G	T	E	N	G	A	P	V	S	L	L	E	L	S	N	G	P	T	L	A	F	K	D	M	A	M	Q	L	L	G	N	L	F	E	Y	T	L	A	K	H	G	E	T	L	N	I	L	G	A	T	S	G	D	T	G	S	A	A	E	Y	A	M
Template Known Secondary structure			S	S			G	G	G	S	S			.	.	.							T	T											S	T	T	S	B	T																		T	T	T										S	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																	.																.	.	.																			.	.	.	.	.	.
Query SS confidence																	.																.	.	.																			.	.	.	.	.	.
Query Sequence		S	A	R	L	G	V	K	A	L	I	V	M	P	T	A	.	T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	.	.	.	V	L	L	H	G	A	N	F	D	E	A	K	A	K	A	I	E	L	.	.	.	.	.	.	S	Q	Q	Q	G	F	T	W	V	P	P	F	D	H	P	M	V	I	A	G	Q	G
Query Conservation																	.																.	.	.																			.	.	.	.	.	.
Alig confidence																	.																.	.	.																			.	.	.	.	.	.													.
Template Conservation																																																																								.
Template Sequence		R	G	K	E	G	V	R	V	F	M	L	S	P	H	K	K	M	S	A	F	Q	T	A	Q	M	Y	S	L	Q	D	P	N	I	F	N	L	A	V	N	G	V	F	D	D	C	Q	D	I	V	K	A	V	S	N	D	H	A	F	K	A	Q	Q	K	I	G	T	V	N	S	I	.	N	W	A	R	V	V	A	Q	V
Template Known Secondary structure		T	T		T	T									T	T		S										T				T	T								S														T								T	T					S	T	T	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		T	L	A	L	E	L	L	Q	Q	D	.	.	.	.	A	H	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	G	H	P	V	D	L	P	R	V	G	L	F	A	E	G	V	A
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																																								.
Template Conservation																																																							.
Template Sequence		V	Y	Y	F	K	G	Y	F	A	A	T	R	S	N	D	E	R	V	S	F	T	V	P	S	G	N	F	G	N	V	C	A	G	H	I	A	R	M	M	G	L	P	I	E	K	L	V	V	A	T	N	E	N	.	D	V	L	D	E	F	F	R	T	G	A	Y	R	V	A	S	N	F	E	R	F	V	F	D	L	L
Template Known Secondary structure											T		S	S	T	T								G	G	G														T	T											T	T		.										S																T
Template Predicted Secondary structure																																																							.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		244	.	.	.	.	.	250	.																				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	R	I	G	D	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	L	C	Q	E	Y	L	D	D	I	I	T	V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	G	A	L	A	L	A	G	M	K	K	Y	I	A	L	H	N
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	R	D	P	A	R	V	V	Q	L	F	R	D	V	E	Q	K	G	G	F	D	L	A	A	S	G	D	F	A	R	V	A	E	F	G	F	V	S	G	R	S	T	H	A	D	R	I	A	T	I	R	D	V	F	E	R	Y	R	T	M	I	D	T	H	T	A	D	G	L	K	V	A	R	E	H	L	R	.	.	.
Template Known Secondary structure		T	T																S				T	T	T	T	T		T						T	T																						S																T	T	S			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	G	E	R	L	A	H	I	L	S	G
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	P	G	V	P	M	V	V	L	E	T	A
Template Known Secondary structure		.	T	T	S								B
Template Predicted Secondary structure		.
Template SS confidence
			420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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