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Job DescriptionP04968
Confidence20.22%DateWed Jan 25 15:20:11 GMT 2012
Rank280Aligned Residues88
% Identity20%Templatec3pk0B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of short-chain dehydrogenase/reductase sdr from2 mycobacterium smegmatis
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPM
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Template Sequence  SVVVTGGTKGIGRGIATVFA. . . . . . . . . . . . . . . . . . . . . RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS
Template Known Secondary structure  TT
SS.....................TT
S
TTSSS


TT
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   8.10.........20....... ..30.........40.........50.........60......
 
   162.......170.........180.........190
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Query Sequence  VIAGQGTLALELLQQDAHLDRVFVPVGGG
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Template Conservation                               
Template Sequence  DRAQCDALAGRAVEEFGGIDVVCANAGVF
Template Known Secondary structure  SS

S




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   67..70.........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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