Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 13 Aligned Residues 347 % Identity 20% Template c3pc3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:cg1753, isoform a; PDBTitle: full length structure of cystathionine beta-synthase from drosophila2 in complex with aminoacrylate Resolution 1.55 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																																				.	.	.
Query SS confidence																							.	.																																				.	.	.
Query Sequence		V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	.	.	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	A	H	.	.	.	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	S	A
Query Conservation																							.	.																																				.	.	.
Alig confidence																							.	.																																				.	.	.
Template Conservation
Template Sequence		I	L	E	V	I	G	C	T	P	L	V	K	L	N	N	I	P	A	S	D	G	I	E	C	E	M	Y	A	K	C	E	F	L	N	P	G	G	S	V	K	D	R	I	G	Y	R	M	V	Q	D	A	E	E	Q	G	L	L	K	P	G	Y	T	I	I	E	P	T	S	G	N	T	G	I	G	L	A	M	A	C	A
Template Known Secondary structure		G	G	G	G	S	S									S					T	T			S							G	G	G	S	T	T	S	B	T	T															T				T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																			.	.	.	.	.																		.												.
Query SS confidence																																			.	.	.	.	.																		.												.
Query Sequence		R	L	G	V	K	A	L	I	V	M	P	T	A	T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	V	L	L	H	G	.	.	.	.	.	A	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	.	G	F	T	W	V	P	P	F	D	H	P	.	M	V	I	A	G	Q	G	T	L	A	L	E
Query Conservation																																			.	.	.	.	.																		.												.
Alig confidence																																			.	.	.	.	.																		.												.
Template Conservation
Template Sequence		V	K	G	Y	K	C	I	I	V	M	P	E	K	M	S	N	E	K	V	S	A	L	R	T	L	G	A	K	I	I	R	T	P	T	E	A	A	Y	D	S	P	E	G	L	I	Y	V	A	Q	Q	L	Q	R	E	T	P	N	S	I	V	L	D	Q	Y	R	N	A	G	N	P	L	A	H	Y	D	G	T	A	A	E
Template Known Secondary structure				T									T	T	S											T	T								T	T	S		T	T	S	T	T	S												S	S	S						T	T	T		T									T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		173	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	L	Q	Q	D	A	.	H	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	G	H	P	V	D	L	P	R	V	G	L	F	A	E	G	V	A	V	K	R	I	G	D	E	T
Query Conservation								.
Alig confidence								.																																																																							.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		I	L	W	Q	L	D	N	K	V	D	M	I	V	V	S	A	G	T	A	G	T	I	S	G	I	G	R	K	I	K	E	Q	V	P	S	C	Q	I	V	G	V	D	P	Y	G	S	I	L	A	R	P	A	E	L	N	K	T	D	V	Q	F	Y	E	V	E	G	I	G	Y	D	F	P	P	T	V	F	D	.	.	.
Template Known Secondary structure						T	T	T			S							S	S	S															T	T	S								T	T				S	S	S	G	G	G	G			S					S			S				S	S			T	T			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.				.	.	.
Predicted Secondary structure																																																																		.										.	.	.
Query SS confidence																																																																		.										.	.	.
Query Sequence		F	R	L	C	Q	E	Y	L	D	D	I	I	T	V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	G	A	L	A	L	A	G	M	K	K	Y	I	A	L	H	N	I	R	G	E	R	L	A	H	I	L	S	.	G	A	N	V	N	F	H	G	L	.	.	.	R	Y	V
Query Conservation																																																																		.										.	.	.
Alig confidence		.	.	.	.																																																		.											.										.	.	.
Template Conservation		.	.	.	.																																																		.
Template Sequence		.	.	.	.	D	T	V	V	D	V	W	T	K	I	G	D	S	D	C	F	P	M	S	R	R	L	N	A	E	E	G	L	L	C	G	G	S	S	G	G	A	M	H	A	A	L	E	H	A	R	K	L	K	.	K	G	Q	R	C	V	V	I	L	P	D	G	I	R	N	Y	M	T	K	F	V	S	D	N	W	M
Template Known Secondary structure		.	.	.	.	G	G	G									G	G	G	T															B																T	T			.	T	T									B	B	G	G	G	G	T	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.																																																		.
Template SS confidence
						286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		S	E	R	C	E	L	G	E	Q	R	E	A	L	L	A	V	T	I	P	E	E	K	G	S	F	L	.	.	.	.	.	.	K	F	C	Q	L	L	G	G	R	S	V	T	E	F	N	Y	R	F	A	D	A	K	N	A	C	I	F	V	G	V	R	L	S	R	G	L	E	E	R	K	E	I	L	Q	M	L	N	D
Query Conservation																												.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	E	P	V	N	E	H	G	H	W	W	W	S	L	A	I	A	E	L	E	L	P	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	L	K	S	D	A	T	V	G	E	A	I	A	L	M	K	K	H	R	V
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					T	T			T	T	T	T	S	B	G	G	G	G						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		B												T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.														.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390																	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		402	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Y	S	V	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	L	P	V	V	D
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions