Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 7 Aligned Residues 302 % Identity 30% Template c3l6cA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:serine racemase; PDBTitle: x-ray crystal structure of rat serine racemase in complex with2 malonate a potent inhibitor Resolution 2.20 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		R	A	P	V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	A	H	G	.	.	.	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	S
Query Conservation																																																														.	.	.
Alig confidence																																																														.	.	.
Template Conservation
Template Sequence		H	L	N	I	Q	D	S	V	H	L	T	P	V	L	T	S	S	I	L	N	Q	I	A	G	R	N	L	F	F	K	C	E	L	F	Q	K	T	G	S	F	K	I	R	G	A	L	N	A	I	R	G	L	I	P	D	T	L	E	G	K	P	K	A	V	V	T	H	S	S	G	N	H	G	Q	A	L	T	Y	A	A
Template Known Secondary structure						T	T	T	S																T	S							G	G	G	S	G	G	G	B	T	T												S		S	S	S	T	T			S							S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	G	V	K	A	L	I	V	M	P	T	A	T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	V	L	L	H	G	A	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	G	F	T	W	V	P	P	F	D	H	P	M	V	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	E	G	I	P	A	Y	I	V	V	P	Q	T	A	P	N	C	K	K	L	A	I	Q	A	Y	G	A	S	I	V	Y	S	E	P	S	D	E	S	R	E	N	V	A	Q	R	I	I	Q	E	T	E	G	I	L	V	H	P	N	Q	E	P	A	V	I	A	G	Q	G	T	I	A	L	E	V	L	N	Q	V	P
Template Known Secondary structure				T	T									T	T	S											T	T								S	S																T						S	S	S	S								T											T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		H	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	G	H	P	V	.	D	L	P	R	V	G	L	F	A	E	G	V	A	V	K	R	I	G	D	E	T	F	R	L	C	Q	E
Query Conservation																																																						.
Alig confidence																																																						.																.
Template Conservation																																																																						.
Template Sequence		L	V	D	A	L	V	V	P	V	G	G	G	G	M	V	A	G	I	A	I	T	I	K	T	L	K	P	S	V	K	V	Y	A	A	E	P	S	N	A	D	D	C	Y	Q	S	K	L	K	G	E	L	T	P	N	L	H	P	P	E	T	I	A	D	G	V	K	S	S	.	I	G	L	N	T	W	P	I	I	R	D
Template Known Secondary structure		T									S	S	S															T	T	S								G	G	G										T	S					S	S					S		G	G	G		S		.			T	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		Y	L	D	D	I	I	T	V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	G	A	L	A	L	A	G	M	K	K	Y	I	A	L	H	N	I	.	R	G	E	R	L	A	H	I	L	S	G	A	N	V	N	F	H	G	L
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		L	V	D	D	V	F	T	V	T	E	D	E	I	K	Y	A	T	Q	L	V	W	E	R	M	K	L	L	I	E	P	T	A	G	V	G	L	A	A	V	L	S	Q	H	F	Q	T	V	S	P	E	V	K	N	I	C	I	V	L	S	G	G	N	V	D	L	T	S	L
Template Known Secondary structure																															G	G	G	G							T	S	T	G	G	G	G	S		T	T										B					S	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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