 |
Job Description | P04968 | Confidence | 29.96% | Date | Wed Jan 25 15:20:11 GMT 2012 |
Rank | 195 | Aligned Residues | 77 |
% Identity | 16% | Template | c3kwpA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:predicted methyltransferase; |
PDBTitle: crystal structure of putative methyltransferase from lactobacillus2 brevis
|
Resolution | 2.29 Å |
|
 |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | A | V | K | R | I | G | D | E | T | F | R | L | C | Q | E | Y | . |
L | D | D | I | I | T | V | D | S | D | A | I | C | A | A | M | K | D | L | F | E | D | V | R | A | V | A | E | P | S | G | A | L | A | L | A | G | M | K | K | Y | I | A | L | H | N | I | R | G | E | R | L | A | H | I | L | S | G | A | N |
Query Conservation |   |
|
|
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   | . |
|
|   |
|
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   | . |   |
|   |   |
|
|   |
|   |   |   |
|
|
Template Sequence |   |
P | T | P | I | G | N | L | D | D | X | T | F | R | A | V | K | T | L | T | A | V | D | L | I | A | A | E | D | T | R | N | T | Q | K | L | L | N | H | F | E | I | T | T | K | Q | I | S | F | H | E | H | N | T | Q | E | R | I | P | Q | L | I | A | K | L | K | . |
Q | G | X | Q | I | A | Q | V | S | D | A | G | X |
Template Known Secondary structure |   |
| B |
| S | S |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  | S | S |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
| S | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |
|  |  |  |  |  |
| S | S | B |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|