Return to main results Retrieve Phyre Job Id

Job DescriptionP04968
Confidence28.14%DateWed Jan 25 15:20:11 GMT 2012
Rank212Aligned Residues97
% Identity21%Templatec3kboB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp
Resolution2.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  KAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPF
Query Conservation     


 






 


 

  


   



   
  
   
   

 

  
   


   
   
   
   
 

Alig confidence 






































........












.......










..
Template Conservation   
 





 
 

  

  
  

  
           ........          
  .......

  



   ..
Template Sequence  EEFSVGIXGAGVLGAKVAESLQAWGFPLRCWSRSRKSWP. . . . . . . . GVESYVGREELRA. . . . . . . FLNQTRVLINL. .
Template Known Secondary structure  TT



STTT

SS



T........TSTTT.......T
S
..
Template Predicted Secondary structure 















........





.......


..
Template SS confidence 















































































   135....140.........150.........160.........170... ......180...... ...190.......
 
   158.160.........170.........180.........190...
Predicted Secondary structure 










Query SS confidence 



































Query Sequence  DHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLA
Query Conservation 
 
  


 



 




    
 










Alig confidence  .




















.












Template Conservation  . 


  
  

    
  

 .

 


 


 

Template Sequence  . LPNTAQTVGIINSELLDQLPD. GAYVLNLARGVHV
Template Known Secondary structure  .



TTTTT
BSTS
T.T
S
GGGB
Template Predicted Secondary structure  .












.







Template SS confidence 



































   198.200.........210........ .220.........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions