Job Description P04968 Confidence 84.86% Date Wed Jan 25 15:20:11 GMT 2012 Rank 66 Aligned Residues 140 % Identity 15% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	Q	K	M	E	K	L	S	S	R	L	D	N	.	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	A	H	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	S	A	R	L	G	V	K	A	L	I	V	M	P	T	A
Query Conservation															.
Alig confidence															.																																																											.	.
Template Conservation																																																																										.	.
Template Sequence		L	D	Y	V	E	D	T	A	K	E	I	G	A	V	N	T	V	K	F	E	N	G	K	A	Y	G	Y	N	T	D	W	I	G	F	L	K	S	L	K	S	L	I	P	E	V	K	E	K	S	I	L	V	L	G	A	G	G	A	S	R	A	V	I	Y	A	L	V	K	E	G	A	K	.	.	V	F	L	W	N	R
Template Known Secondary structure			S										T									T	T																	T	T	T		S			T	T									S													T	T			.	.						S
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																																								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	V	L	L	H	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	G	F	T	W
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																																																																		.	.
Template Sequence		T	K	E	K	A	I	K	L	A	Q	K	F	P	L	E	V	V	N	S	P	E	E	V	I	D	K	V	Q	V	I	V	N	T	T	S	V	G	L	K	D	E	D	P	E	I	F	N	Y	D	L	I	K	K	D	H	V	V	V	D	I	I	Y	K	E	.	.	T	K	L	L	K	K	A	K	E	K	G	A	K	L
Template Known Secondary structure		S											S						S		G	G	G	T	G	G	G		S						S	S	T	T	S	S	T	T				S	S		G	G	G			T	T							S	S	S		.	.										T	T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	P	F	D	H	P	M	V	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	A	H	L
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		L	D	G	L	.	.	.	P	M	L	L	W	Q	G	I	E	A	F	K	I	W	N	G	C	E	V	P
Template Known Secondary structure				S		.	.	.																S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		233	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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