Job Description P04968 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 21 Aligned Residues 305 % Identity 24% Template c2d1fA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine synthase; PDBTitle: structure of mycobacterium tuberculosis threonine synthase Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		Q	P	L	S	G	A	P	E	G	A	E	Y	L	R	A	V	L	R	.	.	.	.	.	A	P	V	Y	E	A	A	Q	V	T	P	L	Q	K	M	E	K	L	S	S	R	L	D	N	V	I	L	V	K	R	E	D	R	Q	P	V	H	S	F	K	L	R	G	A	Y	A	M	M	A	G	L	T	E	E	Q	K	A
Query Conservation																				.	.	.	.	.
Alig confidence				.	.	.														.	.	.	.	.																																																									.
Template Conservation				.	.	.																																																																											.
Template Sequence		Q	P	.	.	.	W	P	G	V	I	A	A	Y	R	D	R	L	P	V	G	D	D	W	T	P	V	T	L	L	E	G	G	T	P	L	I	A	A	T	N	L	S	K	Q	T	G	C	T	I	H	L	K	V	E	G	L	N	P	T	G	S	F	K	D	R	G	M	T	M	A	V	T	D	A	L	A	H	G	Q	.
Template Known Secondary structure				.	.	.								T	G	G	G	S				S	S																								S	S							G	G	G	S	T	T	S	B	T	T														T	T		.
Template Predicted Secondary structure				.	.	.																																																																											.
Template SS confidence
		10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		H	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	F	S	S	A	R	L	G	V	K	A	L	I	V	M	P	T	.	A	T	A	D	I	K	V	D	A	V	R	G	F	G	G	E	V	L	L	H	G	A	N	F	D	E	A	K	A	K	A	I	E	L	S	Q	Q	Q	G	F	T	W	V	P	P	F	D
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		R	A	V	L	C	A	S	T	G	N	T	S	A	S	A	A	A	Y	A	A	R	A	G	I	T	C	A	V	L	I	P	Q	G	K	I	A	M	G	K	L	A	Q	A	V	M	H	G	A	K	I	I	Q	I	D	G	N	F	D	D	C	L	E	L	A	R	K	M	A	A	D	F	P	T	I	S	L	V	N	S	V
Template Known Secondary structure		S							S	S														T									S	S													T	T							S	S																	T	T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																							.																								.	.	.	.	.	.
Query SS confidence																							.																								.	.	.	.	.	.
Query Sequence		H	P	M	V	I	A	G	Q	G	T	L	A	L	E	L	L	Q	Q	D	A	H	.	L	D	R	V	F	V	P	V	G	G	G	G	L	A	A	G	V	A	V	L	I	K	Q	.	.	.	.	.	.	L	M	P	Q	I	K	V	I	A	V	E	A	E	D	S	A	C	L	K	A	A	L	D	A	G	H	P	V	D
Query Conservation																							.																								.	.	.	.	.	.
Alig confidence																							.																								.	.	.	.	.	.																												.	.
Template Conservation																																																																																.	.
Template Sequence		N	P	V	R	I	E	G	Q	K	T	A	A	F	E	I	V	D	V	L	G	T	A	P	D	V	H	A	L	P	V	G	N	A	G	N	I	T	A	Y	W	K	G	Y	T	E	Y	H	Q	L	G	L	I	D	K	L	P	R	M	L	G	T	Q	A	A	G	A	A	P	L	V	L	G	E	P	V	S	H	P	.	.
Template Known Secondary structure										T											S	S			S							S	S	S																T	T	S		S	S										G	G	G						S	S			S	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.
Predicted Secondary structure																					.	.																																																								.
Query SS confidence																					.	.																																																								.
Query Sequence		L	P	R	V	G	L	F	A	E	G	V	A	V	K	R	I	G	D	E	.	.	T	F	R	L	C	Q	E	Y	L	D	D	I	I	T	V	D	S	D	A	I	C	A	A	M	K	D	L	F	E	D	V	R	A	V	A	E	P	S	G	A	L	A	L	A	G	M	K	K	Y	I	A	L	H	N	I	.	R	G	E
Query Conservation																					.	.																																																								.
Alig confidence		.	.	.	.																.	.																																																								.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	T	I	A	T	A	I	R	I	G	S	P	A	S	W	T	S	A	V	E	A	Q	Q	Q	S	K	G	R	F	L	A	A	S	D	E	E	I	L	A	A	Y	H	L	V	A	R	V	E	G	V	F	V	E	P	A	S	A	A	S	I	A	G	L	L	K	A	I	D	D	G	W	V	A	R	G	S
Template Known Secondary structure		.	.	.	.			S		G	G	G			S	S		T	T												T																										B																		T	S	S		T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	H	I	L	S	G	A	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	V	C	T	V	T	G	N	G	L
Template Known Secondary structure									B	B	G	G
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions