Return to main results Retrieve Phyre Job Id

Job DescriptionP69786
Confidence19.17%DateThu Jan 5 12:11:53 GMT 2012
Rank67Aligned Residues94
% Identity18%Templatec3mp7A_
PDB info PDB header:protein transportChain: A: PDB Molecule:preprotein translocase subunit secy; PDBTitle: lateral opening of a translocon upon entry of protein suggests the2 mechanism of insertion into membranes
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   299300.........310.........320.........330.........340.........350.........360.........370.....
Predicted Secondary structure 
















...
Query SS confidence 












































































. . .
Query Sequence  PIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVL. . .
Query Conservation 

 
 
 
  
 

    

 
          
  
     
 
  
            





   


  
 
 ...
Alig confidence 

































..








































...
Template Conservation 








  
  
   
               ..  
  

  
                   
 
        

  
Template Sequence  PIILTFALYANIQLWARVLDRLGHPWLGRFDPTT. . GSPISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFGYL
Template Known Secondary structure  TTS

SSB



TT..S



BSGGGS


SSSTS
Template Predicted Secondary structure 




..







Template SS confidence 















































































   288.290.........300.........310.........320. ........330.........340.........350.........360.....
 
   376...380.........390....
Predicted Secondary structure  .......










Query SS confidence  . . . . . . .


















Query Sequence  . . . . . . . IKALDLKTPGREDATEDAK
Query Conservation  .......
 
 
  




       
Alig confidence  .......


















Template Conservation     

    
  
 






  
  
Template Sequence  WVELTGLDARSIARIPGFRRDPRTLE
Template Known Secondary structure  SSTTGGG




TTTTTTSTT
Template Predicted Secondary structure 












Template SS confidence 

























   366...370.........380.........390.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions