 |
Job Description | P37634 | Confidence | 57.24% | Date | Thu Jan 5 11:56:05 GMT 2012 |
Rank | 109 | Aligned Residues | 56 |
% Identity | 14% | Template | d1yf3a1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| N6 adenine-specific DNA methylase, DAM
|
Resolution | 2.29 |
|
 |
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
. | |
|
|
|
|
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | L | R | S | E | F | Q | K | D | S | R | A | R | V | E | K | A | D | G | F | Q | Q | L | K | A | K | L | P | P | V | S | R | R | G | L | I | L | I | D | P | P | Y | . |
. |
E | . |
. |
. |
. |
. |
. |
. |
. |
M | K | T | D | Y | Q | A | V | V | S | G | I | A | E | G | Y | K | R |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
| . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
K | R | F | N | H | F | K | Q | N | C | D | K | I | I | F | S | S | L | H | F | K | D | V | K | . |
. |
. |
. |
. |
. |
I | L | D | G | D | F | V | Y | V | D | P | P | Y | L | I | T | V | A | D | Y | N | K | F | W | S | E | D | E | E | K | D | L | L | N | L | L | D | S | L | N | D | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |
|
|
| G | G | G |
|
| . | . | . | . | . | . |
|
| T | T |  |  |  |  |  |
|
|
|
| T | T | S |
|
| G | G | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|