Job Description P37634 Confidence 92.20% Date Thu Jan 5 11:56:05 GMT 2012 Rank 56 Aligned Residues 180 % Identity 17% Template c3mb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.
Predicted Secondary structure																																																										.																		.	.	.
Query SS confidence																																																										.																		.	.	.
Query Sequence		Y	L	D	T	H	A	G	A	G	R	Y	Q	L	G	S	E	H	A	E	R	T	G	E	Y	L	E	G	I	A	R	I	W	Q	Q	D	D	L	P	A	E	L	E	A	Y	I	N	V	V	K	H	F	N	R	S	G	Q	.	L	R	Y	Y	P	G	S	P	L	I	A	R	L	L	L	R	E	.	.	.	Q	D	S
Query Conservation																																																										.																		.	.	.
Alig confidence																			.	.	.	.										.	.																									.																		.	.	.
Template Conservation																			.	.	.	.										.	.
Template Sequence		A	I	K	S	H	K	G	H	E	F	K	I	L	R	P	R	I	.	.	.	.	V	D	Y	L	D	K	M	K	R	.	.	G	P	Q	I	V	H	P	K	D	A	A	L	I	V	A	Y	A	G	I	S	P	G	D	F	I	V	E	A	G	V	G	S	G	A	L	T	L	F	L	A	N	I	V	G	P	E	G	R
Template Known Secondary structure						T	T												.	.	.	.							S			.	.		S															T	T			T	T									T	T	S												T	T	S
Template Predicted Secondary structure																			.	.	.	.										.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		L	Q	L	T	E	L	H	P	S	D	Y	P	L	L	R	S	E	F	Q	K	.	.	.	D	S	R	A	R	V	E	K	A	D	G	F	Q	Q	L	K	A	K	L	P	P	V	S	R	R	G	L	I	L	I	D	P	P	Y	E	M	K	T	D	Y	Q	A	V	V	S	G	I	A	E	G	Y	K	R	F	A	T	G
Query Conservation																						.	.	.
Alig confidence																						.	.	.															.	.	.	.	.															.	.	.	.	.															.	.
Template Conservation																																							.	.	.	.	.															.	.	.	.	.															.	.
Template Sequence		V	V	S	Y	E	I	R	E	D	F	A	K	L	A	W	E	N	I	K	W	A	G	F	D	D	R	V	T	I	K	L	K	D	I	Y	E	G	.	.	.	.	.	I	E	E	E	N	V	D	H	V	I	L	D	L	P	.	.	.	.	.	Q	P	E	R	V	V	E	H	A	A	K	A	L	K	.	.	P	G	G
Template Known Secondary structure							S																T		T	T	T						S		G	G	G		.	.	.	.	.					S								S	S	.	.	.	.	.		G	G	G	G										.	.
Template Predicted Secondary structure																																							.	.	.	.	.															.	.	.	.	.															.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.													.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	A	L	W	Y	P	V	V	L	R	Q	Q	I	K	R	M	I	H	D	L	E	A	T	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	K	I	L	Q	I	E	L	A	V	L	P	D	S	D	R	R	G	M	T	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.
Template Sequence		F	F	V	A	Y	T	P	C	.	.	S	N	Q	V	M	R	L	H	E	K	L	R	E	F	K	D	Y	F	M	K	P	R	T	I	N	V	L	V	F	D	Q	E	V	K	K	E	C	M	R	P	R	T	T	A	L	V	H	T	G
Template Known Secondary structure								S	S	.	.														T	G	G	G	B	S																T	T						S						S
Template Predicted Secondary structure										.	.
Template SS confidence
		189	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions