 |
Job Description | P37634 | Confidence | 94.37% | Date | Thu Jan 5 11:56:05 GMT 2012 |
Rank | 34 | Aligned Residues | 94 |
% Identity | 12% | Template | c3gdhC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:trimethylguanosine synthase homolog; |
PDBTitle: methyltransferase domain of human trimethylguanosine2 synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine3 (active form)
|
Resolution | 2.00 Å |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | |
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | A | E | L | E | A | Y | I | . |
N | V | V | K | H | F | N | R | S | G | Q | . |
L | R | Y | Y | P | G | S | P | L | I | A | R | L | L | L | R | E | Q | D | S | L | Q | L | T | E | L | H | P | S | D | Y | P | L | L | R | S | E | F | Q | K | D | S | . |
. |
. |
R | A | R | V | E | K | A | D | G | F | Q | Q | L |
Query Conservation |   |
  |
|   |   |
|   |   |
|
| . |   |   |
|   |   |   |
|   |   |   |   | . |
|   |   |
|
|
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . | . |   |
|   |
|   |   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
T | P | E | K | I | A | E | H | I | A | G | R | V | S | Q | S | F | K | C | D | V | V | V | D | A | F | C | G | V | G | G | N | T | I | Q | F | A | L | T | G | M | R | V | I | A | I | D | I | D | P | V | K | I | A | L | A | R | N | N | A | E | V | Y | G | I | A | D | K | I | E | F | I | C | G | D | F | L | L | L | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  | S |
|  |  |  |  | G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
673 | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | K | L | P | P | V | S | R | R | G | L | I | L | I | D | P | P | Y | E | M | K | T | D |
Query Conservation |   |
  |
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
S | F | L | K | A | D | V | V | F | L | S | P | P | W | G | G | P | D | Y |
Template Known Secondary structure |   |
. | . | . | . | . | G | G |
|
|
| S |  |  |  |  |
|
|
|
|
| S | G | G | G |
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
753 | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|