Job Description P37634 Confidence 97.16% Date Thu Jan 5 11:56:05 GMT 2012 Rank 4 Aligned Residues 152 % Identity 13% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																	.																.																											.	.	.	.
Query SS confidence																	.																.																											.	.	.	.
Query Sequence		E	A	Y	I	N	V	V	K	H	F	N	R	S	G	Q	.	L	R	Y	Y	P	G	S	P	L	I	A	R	L	L	L	.	R	E	Q	D	S	L	Q	L	T	E	L	H	P	S	D	Y	P	L	L	R	S	E	F	Q	K	D	.	.	.	.	S	R	A	R	V	E	K	A	D	G	F	Q	Q	L	K	A	K	L
Query Conservation																	.																.																											.	.	.	.
Alig confidence																	.																.																											.	.	.	.
Template Conservation
Template Sequence		R	D	S	R	L	A	T	R	R	Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R
Template Known Secondary structure													T	T							T		T	T	T									T	T		S							S															T	T			G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	V	S	R	R	G	L	I	L	I	D	P	P	Y	.	.	.	.	.	.	.	.	.	E	M	K	T	D	Y	Q	A	V	V	S	G	I	A	E	G	Y	K	R	F	A	T	G	I	Y	A	L	W	Y	P	V	V	L	R	Q	Q	I	K	R	M	I	H	D	L	E	A	T	G	I	R	K	I	L	Q	I	E
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	X	T	S	D	L	F	Q	K	I	I	A	D	A	A	I	D	A	G	R	D	V	Q	F	I	E
Template Known Secondary structure			T	T											S	S		S	S	T	T		S	S	S				T												T														T	T																		T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	L	P	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	F	R	Q	A	A	D
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions