Job Description P37634 Confidence 95.37% Date Thu Jan 5 11:56:05 GMT 2012 Rank 24 Aligned Residues 138 % Identity 20% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		99	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.
Predicted Secondary structure													.	.																								.	.	.	.	.	.																																.	.	.
Query SS confidence													.	.																								.	.	.	.	.	.																																.	.	.
Query Sequence		G	S	P	L	I	A	R	L	L	L	R	.	.	E	Q	D	S	L	Q	L	T	E	L	H	P	S	D	Y	P	L	L	R	S	E	F	Q	.	.	.	.	.	.	K	D	S	R	A	R	V	E	K	A	D	G	F	Q	Q	L	K	A	K	L	P	P	V	S	R	R	G	L	I	L	I	.	.	.	D	P	P	Y
Query Conservation													.	.																								.	.	.	.	.	.																																.	.	.
Alig confidence													.	.																								.	.	.	.	.	.																			.	.												.	.	.
Template Conservation																																																														.	.
Template Sequence		G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q	.	.	T	P	D	N	T	Y	D	V	V	I	I	D	T	T	D	P	A	S
Template Known Secondary structure		T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S								T	.	.	S		T	T										S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		168	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure							.	.																								.	.
Query SS confidence							.	.																								.	.
Query Sequence		E	M	K	T	D	.	.	Y	Q	A	V	V	S	G	I	A	E	G	Y	K	R	F	A	T	G	I	Y	A	L	W	.	.	Y	P	V	V	L	R	Q	Q	I	K	R	M	I	H	D	L	E	A	T	G	I	R	K	I	L	Q	I	E	L	A	V	L	P	D	S	D	R	R	G	M	T	A	S	G	M	I	V	I
Query Conservation							.	.																								.	.
Alig confidence							.	.										.	.	.	.	.	.									.	.																																.	.
Template Conservation																		.	.	.	.	.	.																																										.	.
Template Sequence		K	L	F	G	E	A	F	Y	K	D	V	L	R	I	L	K	.	.	.	.	.	.	P	D	G	I	C	C	N	Q	G	E	S	I	W	L	D	L	E	L	I	E	K	X	S	R	F	I	R	E	T	G	F	A	S	V	Q	Y	A	L	X	H	V	.	.	P	T	Y	P	C	G	S	I	G	T	L	V	C	S	K
Template Known Secondary structure			S	S														.	.	.	.	.	.												T	T	T																T		S										.	.	T	T	S	T	T	S									S
Template Predicted Secondary structure																		.	.	.	.	.	.																																										.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		244	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	G
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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