Job Description P37634 Confidence 87.81% Date Thu Jan 5 11:56:05 GMT 2012 Rank 69 Aligned Residues 126 % Identity 15% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

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		99	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																							.	.	.	.	.	.	.
Query SS confidence													.	.																							.	.	.	.	.	.	.
Query Sequence		G	S	P	L	I	A	R	L	L	L	R	.	.	E	Q	D	S	L	Q	L	T	E	L	H	P	S	D	Y	P	L	L	R	S	E	F	.	.	.	.	.	.	.	Q	K	D	S	R	A	R	V	E	K	A	D	G	F	Q	Q	L	K	A	K	L	P	P	V	S	R	R	G	L	I	L	I	D	P	P	Y	E	M
Query Conservation													.	.																							.	.	.	.	.	.	.
Alig confidence													.	.																							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																.
Template Conservation																																																									.	.	.	.	.	.	.	.	.																.
Template Sequence		G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	V	N	Q	.	.	.	.	.	.	.	.	.	T	S	Q	T	F	D	V	I	I	S	D	C	T	S	A	.
Template Known Secondary structure			S	S							T	T		T	T									S												S					T	T		T	T		T	T									.	.	.	.	.	.	.	.	.	T	T												T	T	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.																.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																				.										.	.
Query SS confidence																				.										.	.
Query Sequence		K	T	D	Y	Q	A	V	V	S	G	I	A	E	G	Y	K	R	F	.	A	T	G	I	Y	A	L	W	Y	.	.	P	V	V	L	R	Q	Q	I	K	R	M	I	H	D	L	E	A	T	G	I	R	K	I	L	Q	I	E	L	A	V	L	P	D	S	D	R	R	G	M	T	A	S	G	M	I	V	I	N	P	P
Query Conservation																				.										.	.
Alig confidence		.	.	.	.	.	.	.	.	.										.										.	.																			.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																								.												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	F	L	Q	Q	E	E	A	I	D	S	H	R	K	L	S	H	Y	.	F	S	D	V	G	F	Y	Q	A	A	I	.	.	P	T	Y	Y	G	G	I	M	T	F	A	W	A	T	D	N	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.								T															S	S														T	T	.		S										.	.	T	T	S	S	S	S									S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																								.												.	.
Template SS confidence
											174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions