Job Description P37634 Confidence 94.83% Date Thu Jan 5 11:56:05 GMT 2012 Rank 26 Aligned Residues 127 % Identity 17% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		99	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure													.	.																								.	.	.	.	.	.
Query SS confidence													.	.																								.	.	.	.	.	.
Query Sequence		G	S	P	L	I	A	R	L	L	L	R	.	.	E	Q	D	S	L	Q	L	T	E	L	H	P	S	D	Y	P	L	L	R	S	E	F	Q	.	.	.	.	.	.	K	D	S	R	A	R	V	E	K	A	D	G	F	Q	Q	L	K	A	K	L	P	P	V	S	R	R	G	L	I	L	I	D	P	P	Y	E	M	K
Query Conservation													.	.																								.	.	.	.	.	.
Alig confidence													.	.																								.	.	.	.	.	.																			.	.	.												.	.	.	.
Template Conservation																																																														.	.	.												.	.	.	.
Template Sequence		G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	.	.	.	V	T	N	T	Y	D	V	I	I	V	D	.	.	.	.	S	S
Template Known Secondary structure		T	T									T		T	T									S																	G	G	G	G	S	T	T						S							T	T	.	.	.			S									.	.	.	.
Template Predicted Secondary structure																																																														.	.	.												.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.					.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		T	D	Y	Q	A	V	V	S	G	I	A	E	G	Y	K	R	F	A	T	G	I	Y	A	L	W	Y	.	.	P	V	V	L	R	Q	Q	I	K	R	M	I	H	D	L	E	A	T	G	I	R	K	I	L	Q	I	E	L	A	V	L	P	D	S	D	R	R	G	M	T	A	S	G
Query Conservation																												.	.
Alig confidence													.	.	.	.	.	.										.	.																			.
Template Conservation													.	.	.	.	.	.																														.
Template Sequence		N	F	Y	E	K	I	Y	N	A	L	K	.	.	.	.	.	.	P	N	G	Y	C	V	A	Q	C	E	S	L	W	I	H	V	G	T	I	K	N	M	I	G	Y	A	K	K	L	.	F	K	K	V	E	Y	A	N	I	S	I	P	T	Y	P	C	G	C	I	G	I	L	C	C
Template Known Secondary structure													.	.	.	.	.	.												T	T	T														T	T	.		S										T	T	S	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.																														.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions