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Job DescriptionP37634
Confidence95.84%DateThu Jan 5 11:56:05 GMT 2012
Rank17Aligned Residues127
% Identity12%Templatec2cmgA_
PDB info PDB header:transferaseChain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.. .......140.........150.........160.........170......
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Query Sequence  GSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQ. . KDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAV
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Template Sequence  FDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDL. . . DIKKYDLIFCLQE. . . . . PDIHR
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TTSS

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GGGTTTSTTT
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   82.......90.........100.........110.........120.........130..... ....140........ .150...
 
   177..180.........190...... ...200.........210.........220.........230.........240...
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Query Sequence  VSGIAEGYKRFATGIYALWY. . PVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVI
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Template Sequence  IDGLKRMLK. . EDGVFISVAKHPLLEHVSMQNALKNMGGVFS. . . . . . . . VAMPFVAPLRILSNKGYIY
Template Known Secondary structure  TT..
TTT
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   154.....160.. .......170.........180.........190... ......200.........210..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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