Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU6
Confidence5.08%DateThu Jan 5 11:27:18 GMT 2012
Rank74Aligned Residues31
% Identity10%Templatec3i8oA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:kh domain-containing protein mj1533; PDBTitle: a domain of a functionally unknown protein from2 methanocaldococcus jannaschii dsm 2661.
Resolution2.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30......
Predicted Secondary structure 







Query SS confidence 































Query Sequence  LLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
Query Conservation   
 
 

    

 

     









 
Alig confidence 
















.













Template Conservation   



  

 


 

 .        
     
Template Sequence  TIIIPEAVVSELEYQAN. XGREIGYKGIEELR
Template Known Secondary structure  T.TT
Template Predicted Secondary structure 
.


Template SS confidence 































   54.....60.........70 .........80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions