 |
Job Description | P0AFU6 | Confidence | 5.08% | Date | Thu Jan 5 11:27:18 GMT 2012 |
Rank | 74 | Aligned Residues | 31 |
% Identity | 10% | Template | c3i8oA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:kh domain-containing protein mj1533; |
PDBTitle: a domain of a functionally unknown protein from2 methanocaldococcus jannaschii dsm 2661.
|
Resolution | 2.64 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | D | L | S | N | E | V | I | K | Q | L | D | D | L | E | V | Q | R | N | L | P | R | A | D | L | L | R | E | A | V | D |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
T | I | I | I | P | E | A | V | V | S | E | L | E | Y | Q | A | N | . |
X | G | R | E | I | G | Y | K | G | I | E | E | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|