Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU6
Confidence98.10%DateThu Jan 5 11:27:18 GMT 2012
Rank2Aligned Residues45
% Identity11%Templatec2bj3D_
PDB info PDB header:transcriptionChain: D: PDB Molecule:nickel responsive regulator; PDBTitle: nikr-apo
Resolution2.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30.........40.....
Predicted Secondary structure 








.



Query SS confidence 
























.



















Query Sequence  MGRILLDLSNEVIKQLDDLEVQRNL. PRADLLREAVDQYLINQSQT
Query Conservation 
 

 
 
 

    

 

     .









  

      
Alig confidence 
























.



















Template Conservation 
 






  

  

      

 



 





  
 
    
Template Sequence  LIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIRHEWE
Template Known Secondary structure 








T
SSGGG
Template Predicted Secondary structure 








Template SS confidence 













































   3......10.........20.........30.........40........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions