Job Description P39160 Confidence 11.65% Date Thu Jan 5 11:58:16 GMT 2012 Rank 39 Aligned Residues 125 % Identity 14% Template d1qusa_ SCOP info Lysozyme-like Lysozyme-like Bacterial muramidase, catalytic domain Resolution 1.70

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	A	Y	R	K	A	A	F	A	L	M	M	Q	E	Q	A	P	T	L	S	M	P	E	G	T	D	L	N	A	Y	A	T	L	L	I	E	R	F	S	N	P	S	L	R	H	R	T	W	Q	I	A	M	D	G	S	Q	K	L	P	Q	R	L	L	D	P	V	R	L	H	L	Q	N	G	G	S	W	R	H
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.					.	.	.	.																												.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.					.	.	.	.																												.	.	.	.	.	.
Template Sequence		N	N	P	N	A	Q	Q	F	I	D	K	M	V	N	K	.	.	.	.	.	.	.	.	.	H	G	F	D	.	.	.	.	R	Q	Q	L	Q	E	I	L	S	Q	A	K	R	L	D	S	V	L	R	L	M	D	N	Q	G	P	N	.	.	.	.	.	.	G	A	W	L	R	Y	R	K	K	F	I	T	P	D	N
Template Known Secondary structure		T															.	.	.	.	.	.	.	.	.					.	.	.	.									T	T																	S	.	.	.	.	.	.								T	T	T		S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.					.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70										.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.																	.	.	.	.	460	.
Predicted Secondary structure																																												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	L	G	V	A	G	W	M	R	Y	T	Q	G	V	D	E	Q	G	N	A	I	D	V	V	D	P	M	L	A	E	F	Q	K	I	N	A	Q	Y	Q	G	A	.	D	R	V	K	A	L	L	G	L	S	G	I	F	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	P	Q	N	A
Query Conservation																																												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	N	G	V	V	F	W	N	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	A	L	N	R	A	W	Q	V	Y	G	V	P	P	E	I	I	V	G	I	I	G	V	E	T	R	W	G	R	V	M	G	K	T	R	I	L	D	A	L	A	T	L	S	F	N	Y	P	R	R	A
Template Known Secondary structure												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											T	T	T	T																	S		G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.																		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		462		.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		D	.	F	V	G	A	V	T	A	A	Y	Q	Q	L	C	E	R	G	A
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		E	Y	F	S	G	E	L	E	T	F	L	L	M	A	R	D	E	Q	D
Template Known Secondary structure																		T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions