 |
Job Description | P39160 | Confidence | 6.53% | Date | Thu Jan 5 11:58:16 GMT 2012 |
Rank | 81 | Aligned Residues | 38 |
% Identity | 29% | Template | c3tsuA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:transcriptional regulatory protein; |
PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate
|
Resolution | 1.92 Å |
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | K | G | Y | C | A | D | A | A | S | G | Q | L | D | L | N | N | P | L | I | K | H | D | L | E | N | P | T | A | P | K | S | A | I | G | Y | I | V | E | A | L | R | L | R | R | E | K | G | L | K | A | F | T | V | M | S | C | D | N |
Query Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
| . | . | . | . | . |   |
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |   |
|   |
|
|   |
|
|   |
|
|
|   |   |   |   |
Template Sequence |   |
G | I | G | G | F | H | L | . |
. |
. |
. |
. |
A | C | D | A | R | N | S | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | V | A | T | L | R | A | R | K | H | R | P | A | K | P | L | A | V | M | L | P | V | A |
Template Known Secondary structure |   |
| S | S | S |  |  |  | . | . | . | . | . |  |  |  | T | T |
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
| S | S | S |
|
|
|  |  |
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  | . | . | . | . | . |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 230 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|