Return to main results Retrieve Phyre Job Id

Job DescriptionP39160
Confidence44.96%DateThu Jan 5 11:58:16 GMT 2012
Rank6Aligned Residues55
% Identity20%Templatec3fggA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein bce2196; PDBTitle: crystal structure of putative ecf-type sigma factor negative effector2 from bacillus cereus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320.........330.........340..... ....350........
Predicted Secondary structure 












.
Query SS confidence 









































.












Query Sequence  YLGYLGGYETIADTVTNPAYRKAAFALMMQEQAPTLSMPEGT. DLNAYATLLIERF
Query Conservation 


 
 
  

 

  
  
   
   
  

 
 
      .

  
   

 

Alig confidence 









































.












Template Conservation 





   


 


  


 
 



  
 
 

        


 
  

   
Template Sequence  YFDKLNGHKSSKEVLTQEEFDRYXEALXTHEIVRVKTKSTGAIKVEEVPEAYKERF
Template Known Secondary structure  TT


S
T
SS


GGGS
Template Predicted Secondary structure 







Template SS confidence 























































   90.........100.........110.........120.........130.........140.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions