Job Description P39160 Confidence 50.52% Date Thu Jan 5 11:58:16 GMT 2012 Rank 5 Aligned Residues 150 % Identity 14% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		L	E	S	R	I	V	H	L	G	C	G	A	F	H	R	A	H	Q	A	L	Y	T	H	H	L	L	E	S	T	D	S	D	W	G	I	C	E	V	N	L	M	P	G	N	D	R	V	L	I	E	N	L	K	K	Q	Q	L	L	Y	T	V	A	E	K	G	A	E	S	T	E	.	.	.	.	.	.	L	K	I	I
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence																					.	.	.	.																																	.	.	.													.	.	.	.	.	.
Template Conservation																					.	.	.	.																																	.	.	.
Template Sequence		F	K	N	R	F	V	I	L	G	F	G	C	V	G	Q	A	L	X	P	.	.	.	.	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	.	.	.	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N
Template Known Secondary structure				S								S									.	.	.	.						B				G	G	G						S	S			S								T			.	.	.								T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure																					.	.	.	.																																	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	M	K	E	A	L	H	P	E	I	D	G	C	E	G	I	L	N	A	M	A	R	P	Q	T	A	I	V	S	L	T	V	T	E	K	G	Y	C	A	D	A	A	S	G	Q	L	D	L	N	N	P	L	I	K	H	D	L	E	N	P	T	A	P	K	S	A	I	G	Y	I	V	E	A	L	R	L	R	R	E
Query Conservation
Alig confidence														.			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	L	I	D	V	S	I	G	I	S	S	.	L	A	.	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D
Template Known Secondary structure									S	S	S			.			.									T						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	T	T
Template Predicted Secondary structure														.			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.		.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		175	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure									.										.
Query SS confidence									.										.
Query Sequence		K	G	L	K	A	F	T	.	V	M	S	C	D	N	V	R	E	.	N	G	H	V	A	K	V	A	V	L	G	L	A	Q	A	R	D
Query Conservation									.										.
Alig confidence			.	.					.										.
Template Conservation			.	.
Template Sequence		K	.	.	T	Q	K	T	A	L	I	T	H	G	A	N	P	G	L	V	S	H	F	I	K	E	A	L	L	N	I	A	K	D	N	G
Template Known Secondary structure		T	.	.			S					S		B	T	T	T	B																T	T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		147			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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