Return to main results Retrieve Phyre Job Id

Job DescriptionP39160
Confidence14.04%DateThu Jan 5 11:58:16 GMT 2012
Rank31Aligned Residues52
% Identity13%Templatec1dvpA_
PDB info PDB header:transferaseChain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   427..430.........440.........450.........460.........470.........
Predicted Secondary structure 
















Query SS confidence 




















































Query Sequence  LAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGA
Query Conservation     
            
   
    
 
 

     
   
      
   
 
Alig confidence 




































.














Template Conservation 
  
 

        

 


 

  

  
   
 
.  
   
  

  
 
Template Sequence  CEMFSSFLESTPHENVRQKMLELVQTWAYAFRSSDKY. QAIKDTMTILKAKGH
Template Known Secondary structure 
S
TTT
SS
.
TT
Template Predicted Secondary structure 










.


Template SS confidence 




















































   87..90.........100.........110.........120... ......130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions