Job Description P27837 Confidence 3.27% Date Thu Jan 5 11:44:14 GMT 2012 Rank 35 Aligned Residues 147 % Identity 9% Template d1wpga4 SCOP info Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M Resolution 2.30

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.																														.
Predicted Secondary structure																										.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	L	A	K	N	R	Q	L	P	A	A	M	A	K	V	S	R	H	G	V	P	V	A	.	.	.	.	.	.	.	G	V	A	V	S	I	A	I	L	L	I	G	S	C	L	N	Y	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P
Query Conservation																										.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	L	G	F	N	P	P	D	L	D	I	M	D	R	P	P	R	S	P	K	E	P	L	I	S	G	W	L	F	F	R	Y	M	A	I	G	G	Y	V	G	A	A	T	V	G	A	A	A	W	W	F	M	Y	A	E	D	G	P	G	V	T	Y	H	Q	L	T	H	F	M	Q	C	T	E	D	H	P	H	F	E
Template Known Secondary structure					T	T					S	G	G	G	G	S					T	T			S	S		T																									T	T	T	S	S	S	S				T	T	S	G	G	G	G	T	T	T	T	S	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		N	P	Q	R	V	F	V	Y	V	Y	S	A	S	V	L	P	G	M	V	P	W	F	V	I	L	I	S	Q	L	R	F	R	R	A	H	K	A	A	I	A	S	H	P	F	R	S	I	L	F	P	W	A	N	Y	V	T	M	A	F	L	I	C	V	L	I	G	M	Y	.	.	.	.	.	.	F	N	E	D	T	R
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	D	C	E	I	F	E	A	P	E	P	M	T	M	A	L	S	V	L	V	T	I	E	M	C	N	A	L	N	S	L	S	E	N	Q	S	L	M	R	M	P	P	W	V	N	I	W	L	L	G	S	I	C	L	S	M	S	L	H	F	L	I	L	Y	V	D	P	L	P	M	I	F	K	L	K	A	L	D	L
Template Known Secondary structure			S		G	G	G	G	G																						T	T	S		S	S			T	T	T	S		G	G	G																					S	T	T	T					T
Template Predicted Secondary structure
Template SS confidence
		885	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	L	F	V	G	I	I	F	M	L	A	V	T	A	I	Y	K	V	F	G	L	N	R	H	G	K	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	W	L	M	V	L	K	I	S	L	P	V	I	G	L	D	E	I	L	K	F	I	A	R	N	Y	L	E
Template Known Secondary structure												T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		965	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions