Job Description P27837 Confidence 3.54% Date Thu Jan 5 11:44:14 GMT 2012 Rank 32 Aligned Residues 83 % Identity 7% Template d1oedc_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	V	S	I	A	I	L	L	I	G	S	C	L	N	Y	I	I	P	N	P	Q	R	V	F	V	Y	V	Y	S	A	S	V	L	P	G	M	V	P	W	F	V	I	L	I	S	Q	L	R	F	R	R	A	H	K	A	A	I	A	S	H	P	F	R	S	I	L	F	P	W	A	N	Y	V	T	M	A	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	S	V	L	L	A	Q	A	V	F	L	L	L	T	S	Q	R	L	P	E	T	A	L	A	V	P	L	I	G	K	Y	L	M	F	I	M	S	L	V	T	G	V	I	V	N	C	G	I	V	L	N	F	H	F	R	T	G	Q	T	I	D	R	L	S	M	F	I	I	T	P	V	M	V	L	G	T	I	F	I
Template Known Secondary structure																											S				T																														S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		415	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		473	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions