 |
Job Description | P27837 | Confidence | 2.08% | Date | Thu Jan 5 11:44:14 GMT 2012 |
Rank | 72 | Aligned Residues | 66 |
% Identity | 6% | Template | c3ifxB_ |
PDB info |
PDB header:membrane protein | Chain: B: PDB Molecule:voltage-gated potassium channel; |
PDBTitle: crystal structure of the spin-labeled kcsa mutant v48r1
|
Resolution | 3.56 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | D | N | K | P | E | L | Q | R | G | L | E | A | R | H | I | E | L | I | A | L | G | G | T | I | G | V | G | L | F | M | G | A | A | S | T | L | K | W | A | G | P | S | V | L | L | A | Y | I | I | A | G | L | F | V | F | F | I | M | R | S | M | G | E | M | L | F | L | E |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|
|
| . | . | . | . |
|
|
|
|
|
|   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
L | A | E | R | G | A | P | G | A | Q | L | I | T | Y | P | R | A | L | W | W | S | V | E | T | A | T | T | . |
. |
. |
. |
V | G | Y | G | D | L | Y | P | V | T | L | W | G | R | L | V | A | V | V | V | M | V | A | G | I | T | S | F | G | L | V | T | A | A | L | A | T | W | F |
Template Known Secondary structure |   |
|
| S | S | S | S | S |
|
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . |
|
|
| S | S |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|