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Job DescriptionP27837
Confidence7.04%DateThu Jan 5 11:44:14 GMT 2012
Rank21Aligned Residues93
% Identity11%Templatec3b8eC_
PDB info PDB header:hydrolase/transport proteinChain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390.........400.........410.........420... ......430........
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Query Sequence  VLPGMVPWFVILISQLRFRRAHKAAIASHPFRSILFPWANYVTMAFLICVLIGMYF. . . . . . . . . NEDTRMSLFVGIIFM
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Template Sequence  HTPFFVTIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLI
Template Known Secondary structure  TTSS
SSS
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TTTTTGGG
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   912.......920.........930.........940.........950.........960.........970.........980.........990.
 
   439440.........450.........460
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Query Sequence  LAVTAIYKVFGLNRHGKAHKLE
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Template Conservation 
      
   
          
Template Sequence  FVYDEVRKLIIRRRPGGWVEKE
Template Known Secondary structure  STT
TTTTT
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   992.......1000.........1010...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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