 |
Job Description | P27837 | Confidence | 2.13% | Date | Thu Jan 5 11:44:14 GMT 2012 |
Rank | 69 | Aligned Residues | 43 |
% Identity | 7% | Template | c2k21A_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e |
PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c
|
Resolution | UNK |
|
  |   |
354 | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | P | Q | R | V | F | V | Y | V | Y | S | A | S | V | L | P | G | M | V | P | W | F | V | I | L | I | S | Q | L | R | F | R | R | A | H | K | A | A | I | A | S | H | P | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|
|
|   |
|
|   |
|
|   |
|   |   |   | . | . |
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|   |
|
Template Sequence |   |
D | G | K | L | E | A | L | Y | V | L | M | V | L | G | F | F | G | F | F | T | L | . |
. |
G | I | M | L | S | Y | I | R | S | K | K | L | E | H | S | N | D | P | F | N | V | Y |
Template Known Secondary structure |   |
T |
| S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| T | T | T | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|