Job Description P27837 Confidence 2.40% Date Thu Jan 5 11:44:14 GMT 2012 Rank 55 Aligned Residues 140 % Identity 9% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	A	L	A	K	N	R	Q	L	P	A	A	M	A	K	V	S	R	H	G	V	P	V	A	G	V	A	V	S	I	A	I	L	L	I	G	S	C	L	N	Y	I	I	P	N	P	Q	R	V	F	V	Y	V	Y	S	A	S	V	L	P	G	M	V	P	W	F	V	I	L	I	S	Q	L	R	F	R	R	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	A	I	A	Y	D	N	A	P	Y	S	Q	T	P	V	K	W	N	L	P	K	L	W	G	M	S	V	L	L	G	V	V	L	A	V	G	T	W	I	T	V	T	T	M	Y	A	Q	G	E	N	G	G	I	V	Q	N	F	G	N	M	D	E	V	L	F	L	Q	I	S	L	T	E	N	W	L	I	F	I	T
Template Known Secondary structure										S	G	G	G	G	S						S	S	S		S	S																					T	T	T	T	T	T			S	S	S	S	S	S	S																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	I	A	S	H	P	F	R	S	I	L	F	P	W	A	N	Y	V	T	M	A	F	L	I	C	V	L	I	G	M	Y	F	N	E	D	T	R	M	S	L	F	V	G	I	I	F	M	L	A	V	T	A	I	Y	K	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	N	G	P	F	W	S	S	I	P	S	W	Q	L	S	G	A	I	F	L	V	D	I	L	A	T	C	F	T	I	W	G	W	F	E	H	S	D	T	S	I	V	A	V	V	R	I	W	I	F	S	F	G	I	F	C	I	M	G
Template Known Secondary structure		S		S	S	S		S			S		T																			S	S	S	S	T	T	S		S					T								T	T
Template Predicted Secondary structure
Template SS confidence
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions