 |
Job Description | P0AG16 | Confidence | 33.68% | Date | Thu Jan 5 11:27:50 GMT 2012 |
Rank | 353 | Aligned Residues | 44 |
% Identity | 16% | Template | d1qo0d_ |
SCOP info | Flavodoxin-like
| CheY-like
| Positive regulator of the amidase operon AmiR
|
Resolution | 2.25 |
|
  |   |
358 | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | D | K | N | V | L | L | V | D | D | S | I | V | R | G | T | T | S | E | Q | I | I | E | M | A | R | E | A | G | A | K | K | V | Y | L | A | S | A | A | P | E | I | R | F | P | N |
Query Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |
|   |
|   |
|
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|
|
|
| . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
L | R | E | L | Q | V | L | V | L | N | P | . |
. |
. |
P | G | E | V | S | D | A | L | V | L | Q | L | I | R | I | G | C | S | V | R | Q | C | W | P | P | P | E | A | F | D | V | P | V |
Template Known Secondary structure |   |
G | G | G |
|  |  |  |  |  | S |
| . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| S |
|
| S | S |
| S | S |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|