Job Description P0AG16 Confidence 29.71% Date Thu Jan 5 11:27:50 GMT 2012
Rank 394 Aligned Residues 38
% Identity 26% Template c3qglD_
PDB info
PDB header: protein bindingChain: D: PDB Molecule: sorting nexin-27;
PDBTitle: crystal structure of pdz domain of sorting nexin 27 (snx27) in complex2 with the eseskv peptide corresponding to the c-terminal tail of girk3
Resolution 3.31 Å
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Show / Hide Conservation and Alignment quality
   
357 . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E F R D K N V L L V D D S I V R G T T S E Q I I E M A R E A G A K K V Y L A S
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Alig confidence  
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Template Conservation  
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Template Sequence  
V R K G D R I L E V N G V N V E G A T H K Q V V D L I R A G .
E K E L I L T V
Template Known Secondary structure  
T T T T T T . S S
Template Predicted Secondary structure  
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Template SS confidence  
   
93 . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . .
. . . . . . . 130
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]