Job Description P0AG16 Confidence 99.96% Date Thu Jan 5 11:27:50 GMT 2012 Rank 14 Aligned Residues 212 % Identity 20% Template c3mdnD_ PDB info PDB header:transferase Chain: D: PDB Molecule:glutamine aminotransferase class-ii domain protein; PDBTitle: structure of glutamine aminotransferase class-ii domain protein2 (spo2029) from silicibacter pomeroyi Resolution 2.09 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		C	G	I	V	G	I	A	G	V	M	P	V	N	Q	S	I	Y	D	A	L	T	V	L	Q	H	R	G	Q	D	A	A	G	I	I	T	I	D	A	N	N	C	F	R	L	R	K	A	N	G	L	V	.	S	D	V	F	E	A	R	H	M	Q	R	L	Q	G	N	M	G	I	G	H	V	R	Y	P	T	A	G	S
Query Conservation																																																					.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.																						.																							.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template Sequence		C	R	W	A	A	Y	H	G	T	P	I	F	L	E	D	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	V	A	W	Y	D	A	R	P	E	P	G	L	Y	R	D	V	Y	P	A	W	S	D	P	N	L	R	A	V	A	H	H	V	R	S	G	L	F	L	S	H	V	N	.	.	.	.	.	.
Template Known Secondary structure														G	G	G	T		.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S	S	S							S	S		T	T	T																						.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.														.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		S	S	A	S	E	A	Q	P	F	Y	V	N	S	P	Y	G	I	T	L	A	H	N	G	N	L	T	N	A	H	E	L	R	K	K	L	F	E	E	K	R	.	.	.	.	.	R	H	I	N	T	T	S	D	S	E	I	L	L	N	I	F	A	S	E	L	D	N	F	R	H	Y	P	L	E	A	D	N	I	F	A
Query Conservation																																										.	.	.	.	.
Alig confidence		.	.	.	.								.	.	.																									.		.	.	.	.	.																								.
Template Conservation		.	.	.	.								.	.	.																									.																														.
Template Sequence		.	.	.	.	N	C	H	P	F	A	A	.	.	.	R	R	W	C	F	X	H	N	G	Q	V	G	G	F	E	A	F	R	K	Q	A	D	X	A	.	I	A	D	E	F	Y	T	Y	R	K	G	S	T	D	S	E	V	L	F	L	L	A	L	S	E	G	L	E	H	.	D	P	H	G	A	L	A	R	A	I	A
Template Known Secondary structure		.	.	.	.			S					.	.	.	T	T										T	T	G	G	G	G							T	.	S						T	T			S														T	T	T	T	T	.
Template Predicted Secondary structure		.	.	.	.								.	.	.																									.																														.
Template SS confidence
						98	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.			.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure										.	.								.
Query SS confidence										.	.								.
Query Sequence		A	I	A	A	T	N	R	L	.	.	I	R	G	A	Y	A	C	.	V	A	M	I	I	G	H	G	M	V	A	F	R	D	P	N	G	I	R	P	L	V	L	G	K	R	D	I	D	E	N	R	T	E	Y	M	V	A	S	E	S	V	A	L	D	T	L	G	F	D	F	L	R	D	V	A	P	G	E	A	I	Y
Query Conservation										.	.								.
Alig confidence										.	.								.																												.																					.	.	.
Template Conservation																																															.																					.	.	.
Template Sequence		R	L	E	G	L	S	R	A	H	G	T	T	P	H	X	R	L	S	A	A	F	S	D	G	Q	T	L	Y	A	A	R	Y	S	S	D	H	I	A	P	S	V	Y	Y	R	Y	.	S	H	A	R	Q	G	W	A	V	V	S	E	P	L	E	T	D	E	G	D	.	.	.	W	T	E	L	R	P	G	R	X	L	T
Template Known Secondary structure											S		S	S	S										S	S									S	S	S										.		T	T	T	T						S	S					S	S			.	.	.						T	T
Template Predicted Secondary structure																																															.																					.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	E	E	G	Q	L	F	T	R	Q	C	A	D
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		I	G	A	E	G	.	A	A	E	R	D	F	A	P
Template Known Secondary structure				T	T		.
Template Predicted Secondary structure							.
Template SS confidence
		245	.	.	.	.		250	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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