 |
Job Description | P0AG16 | Confidence | 53.56% | Date | Thu Jan 5 11:27:50 GMT 2012 |
Rank | 209 | Aligned Residues | 74 |
% Identity | 16% | Template | c3ej6D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:catalase-3; |
PDBTitle: neurospora crassa catalase-3 crystal structure
|
Resolution | 2.30 Å |
|
 |
  |   |
309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | |
|
. | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | L | E | I | A | R | I | L | G | K | P | Y | R | Q | G | F | V | K | N | R | Y | V | G | R | T | F | I | M | P | G | Q | Q | L | R | R | K | S | V | R | R | K | L | N | A | N | R | A | E | F | R | D | K | N | V | L | L | V | . |
. |
D | D | S | I | V | R | G | T | T | S | E | Q | I | I | E | M | A | R | E | A |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|
|
|   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|
|
|   |   |
|   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|   |   |
|
| . |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
V | A | K | R | V | A | V | A | L | G | L | E | A | P | Q | P | . |
D | P | T | Y | Y | H | N | N | V | T | R | G | V | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | N | E | S | L | P | T | I | A | T | L | R | V | G | V | L | S | T | T | K | G | . |
G | S | L | D | K | A | K | A | L | K | E | Q | L | E | K | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
| . |
| T | T | S |
|
|
|
|
|
| S | S |
|
| S | . | . | . | . | . | . | . | . | . | . | T | T | S |
|
| S |
|
| T | T |
|  |  |  |  |  |
|
| S | S | S | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
528 | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | |
. | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | |
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . |
  |
  |   |
387 | . | . | 390 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | K | K | V | Y | L | A |
Query Conservation |   |
|
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|
|
Template Sequence |   |
G | L | K | V | T | V | I | A |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
596 | . | . | . | 600 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|