Job Description P0AG16 Confidence 58.73% Date Thu Jan 5 11:27:50 GMT 2012 Rank 186 Aligned Residues 157 % Identity 14% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.														.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	D	V	V	I	P	I	P	E	T	S	C	D	I	A	L	E	I	A	R	I	L	G	K	P	Y	R	Q	G	F	V	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	V	G	R	T	F	I	M	P	G	Q	Q	L	R	R	K	S	V	R	R	K	L	N	A	N	R	A	E	F	R	D	K
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																																																							.	.
Template Sequence		E	G	Y	Y	V	A	G	V	N	P	F	L	S	R	T	A	T	T	L	I	R	R	R	K	C	Q	L	I	T	A	P	F	P	I	G	P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	I	Q	.	.	P	Q	G	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	Y	L	E	L	V	R	G	K
Template Known Secondary structure		T	T						S	S	T	T											T	T										S	B																T	T			.	.			S											T	T								T	T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.																		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	L	L	V	D	D	S	I	V	R	G	T	T	S	E	Q	I	I	E	M	A	R	E	A	G	A	K	K	V	Y	L	A	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	E	I	R	F	P	N	V	Y	G	I	D	M	P	S	A	T	E	L	I	A	H	G	R	E	V	D
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation						.	.	.	.																																																																.	.	.	.	.	.	.
Template Sequence		S	V	F	F	.	.	.	.	M	G	D	N	L	L	E	I	S	L	A	R	F	L	I	R	C	G	M	R	V	L	E	I	G	I	P	Y	M	D	K	R	Y	Q	A	A	E	L	A	L	L	S	Q	T	C	A	E	M	G	H	P	L	P	T	I	V	E	K	P	D	N	Y	N	.	.	.	.	.	.	.	Q	L
Template Known Secondary structure						.	.	.	.				S	S												T	T									S																					T	T									S						.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.																																																																.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.								.	.
		425	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	I	R	Q	I	I	G	A	D	G	.	L	I	F	Q	D	L	N	D	L	I	D	A	V	R	A	E	N	P	D	I	Q	Q	F	E	C	S	V	F	N	G
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		Q	R	I	K	A	L	Q	P	D	L	V	I	T	G	M	A	H	A	N	P	L	E	A	R	G	I	S	T	K	W	S	V	E	F	T	F	A	Q	I	H	G
Template Known Secondary structure										S														T	B	T						T	T					S			B	S
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions