Job Description P0AG16 Confidence 99.91% Date Thu Jan 5 11:27:50 GMT 2012 Rank 19 Aligned Residues 213 % Identity 21% Template c2vdcF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:glutamate synthase [nadph] large chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																								.	.	.
Query SS confidence																				.	.																								.	.	.
Query Sequence		Q	S	I	Y	D	A	L	T	V	L	Q	H	R	G	Q	D	A	A	.	.	G	I	I	T	I	D	A	N	N	C	F	R	L	R	K	A	N	G	L	V	S	D	V	.	.	.	F	E	A	R	H	M	Q	R	L	Q	G	N	M	G	I	G	H	V	R	Y	P	T	A	G	S	S	S	A	S	E	A	Q	P	F
Query Conservation																				.	.																								.	.	.
Alig confidence																				.	.																								.	.	.
Template Conservation
Template Sequence		L	D	L	Y	I	I	R	R	R	I	E	K	A	V	K	G	E	Q	I	N	D	F	Y	I	C	S	L	S	A	R	S	I	I	Y	K	G	M	F	L	A	E	Q	L	T	T	F	Y	P	D	L	L	D	E	R	F	E	S	D	F	A	I	Y	H	Q	R	Y	S	T	N	T	F	P	T	W	P	L	A	Q	P	F
Template Known Secondary structure																			T			S								S	S										G	G	G						G	G	G	G		T	T			B	S										S		S				G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																			130	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	N	S	P	Y	G	I	T	L	A	H	N	G	N	L	T	N	A	H	E	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	L	F	E	E	K	R	R	H	I	N	T	T	S	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	L	L	N	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		R	M	.	.	.	.	.	.	.	L	A	H	N	G	E	I	N	T	V	K	G	N	V	N	W	M	K	A	H	E	T	R	M	E	H	P	A	F	G	T	H	M	Q	D	L	K	P	V	I	G	V	G	L	S	D	S	G	S	L	D	T	V	F	E	V	M	V	R	A	G	R	T	A	P	M	V	K	M	M	L
Template Known Secondary structure		S	S	.	.	.	.	.	.	.								T	T													T	T				S	T	T	G	G	G						S	S	S		T	T																	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		226	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	S	E	L	D	N	F	R	H	Y	P	L	E	A	D	N	I	F	A	A	I	A	A	T	N	R	L	I	R	G	A	Y	A	C	V	A	M	I	I	G	H	G	M	V	A	F	R	D	P	N	G	I	R	P	L	V	L	G	K	R	D	I	D	E	N	R	T	E	Y	M	V	A	S	E	S	V	A	L	D
Query Conservation
Alig confidence																																	.																															.	.	.	.
Template Conservation																																	.																															.	.	.	.
Template Sequence		V	P	Q	A	L	T	S	S	Q	T	T	P	D	N	H	K	A	L	I	Q	Y	C	N	S	V	M	E	P	W	D	G	.	P	A	A	L	A	M	T	D	G	R	W	V	V	G	G	M	D	R	N	G	L	R	P	M	R	Y	T	I	T	T	.	.	.	.	D	G	L	I	I	G	G	S	E	T	G	M	V	K
Template Known Secondary structure		S							S	T	T	S															S					S	.	S							S	S	S								T	T			S								T	.	.	.	.	T	S						S	S	S		S	S
Template Predicted Secondary structure																																	.																															.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.	.	.	.	.	.	.	.	.	370	.	.	.
		216	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.		.	.	.	.	.
Predicted Secondary structure											.	.											.
Query SS confidence											.	.											.
Query Sequence		T	L	G	F	D	F	L	R	D	.	.	V	A	P	G	E	A	I	Y	I	T	.	E	E	G	Q	L
Query Conservation											.	.											.
Alig confidence											.	.											.
Template Conservation
Template Sequence		I	D	E	T	Q	V	I	E	K	G	R	L	G	P	G	E	M	I	A	V	D	L	Q	S	G	K	L
Template Known Secondary structure				G	G	G									T	T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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