 |
Job Description | P0AG16 | Confidence | 29.64% | Date | Thu Jan 5 11:27:50 GMT 2012 |
Rank | 397 | Aligned Residues | 67 |
% Identity | 16% | Template | c2ixdB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:lmbe-related protein; |
PDBTitle: crystal structure of the putative deacetylase bc1534 from2 bacilus cereus
|
Resolution | 1.8 Å |
|
 |
  |   |
359 | 360 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | K | N | V | L | L | V | . |
. |
. |
. |
. |
D | D | S | I | V | R | G | T | T | S | E | Q | I | I | E | M | A | R | E | A | G | A | K | K | V | Y | L | A | S | A | A | P | E | I | R | F | P | N | V | Y | G | I | D | M | P | S | A | T | E | L | I | A | H | G | R | E | V | D | E | I | R | Q | I | I | G | A | D |
Query Conservation |   |
  |
|
|   |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |
|   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|   |   |   |   |   |
|
|
|
|   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|   |   |   |   | . | . | . | . |   |
|   |   | . |
|   |
|
|   |
|
|   |
| . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
S | G | L | H | I | L | A | F | G | A | H | A | D | D | V | E | I | G | M | A | G | T | I | A | K | Y | T | K | . |
. |
. |
. |
Q | G | Y | E | . |
V | G | I | C | D | L | T | E | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | S | S | N | G | T | I | E | L | R | K | E | E | A | K | V | A | A | R | I | M | G | V | K |
Template Known Secondary structure |   |
|
|
| S |  |  |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | T | T |
|
| . |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | T | T |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
| . |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
  |   |
434 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
G | L | I | F | Q | D |
Query Conservation |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
Template Sequence |   |
T | R | L | N | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|