Job Description P0AG16 Confidence 99.34% Date Thu Jan 5 11:27:50 GMT 2012 Rank 56 Aligned Residues 139 % Identity 19% Template c2c4kD_ PDB info PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) Resolution 2.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	L	G	E	K	I	A	R	E	W	E	D	L	D	I	D	V	V	I	P	I	P	E	T	S	C	D	I	A	L	E	I	A	R	I	L	G	K	P	Y	R	Q	G	F	V	K	N	R	Y	V	G	R	T	F	I	M	P	G	Q	Q	L	R	R	K	S	V	R	R	K	L	N	A	N	R	A	E	F	R	D
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	L	L	Q	Y	I	Q	E	E	I	P	N	Y	R	N	A	V	I	V	A	K	S	P	D	A	A	K	R	A	Q	S	Y	A	E	R	L	R	L	G	L	A	V	I	H	P	P	I	T	V	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	G	G
Template Known Secondary structure												S	T	T	G	G	G						S	S	G	G	G												T														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																									.	.	.	210
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	L	L	V	D	D	S	I	V	R	G	T	T	S	E	Q	I	I	E	M	A	R	E	A	G	A	K	K	V	Y	L	A	S	A	A	P	E	I	R	F	P	N	V	Y	G	I	D	M	P	S	A	T	E	L	I	A	H	G	R	E	V	D	E	I	R	Q	I	I	G	A	D	G	L	I	F	Q	D	L
Query Conservation
Alig confidence																																																														.
Template Conservation																																																														.
Template Sequence		R	I	A	I	I	V	D	D	I	I	D	D	V	E	S	F	V	A	A	A	E	I	L	K	E	R	G	A	Y	K	I	Y	V	M	A	T	H	G	I	L	S	A	E	A	P	R	L	I	E	E	S	S	V	D	E	V	V	V	T	N	.	T	V	P	H	E	V	Q	K	L	Q	C	P	K	I	K	T	V	D	I
Template Known Secondary structure									S			S	S	T												T	T	T															T	T								S	S								B	.	T	S										T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		441	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions