Job Description P0AG16 Confidence 28.63% Date Thu Jan 5 11:27:50 GMT 2012 Rank 408 Aligned Residues 144 % Identity 13% Template c1zq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of n-acetyl-l-ornithine transcarbamylase2 complexed with cp Resolution 1.95 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.										.	.	.	260	.	.	.	.	.	.	.														.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	Q	L	F	T	R	Q	C	A	D	N	P	V	S	N	P	C	L	F	E	.	.	.	.	.	.	.	.	.	Y	V	Y	F	A	R	P	D	S	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	I	S	V	Y	S	A	R	V	N	M	G	T	K	L	G	E	K	I	A	R	E	W	E	D
Query Conservation																							.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																.		.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.		.	.	.	.	.	.	.	.	.
Template Sequence		K	G	K	S	I	A	L	V	F	F	N	P	S	M	R	T	R	T	S	F	E	L	G	A	F	Q	L	G	G	H	A	V	V	L	Q	P	G	K	D	A	W	P	I	E	F	N	L	G	T	V	M	D	G	D	T	E	E	H	I	A	E	V	A	R	V	L	G	R	Y	.	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T								S	S			S													T	T								B	T	T	T	B						S	S	S					S	S																.		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.		.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.									.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.
Query Sequence		L	D	I	D	V	V	I	P	I	P	E	T	S	C	.	.	.	.	.	.	.	.	D	I	A	L	E	I	A	R	I	L	G	K	P	Y	R	Q	G	F	V	K	N	R	Y	V	G	R	T	F	I	M	P	G	Q	Q	L	R	R	K	S	V	R	R	K	L	N	A	N	R	A	E	F	R	D	K	N	V	L	L
Query Conservation																.	.	.	.	.	.	.	.
Alig confidence		.			.											.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.					.																			.
Template Conservation		.			.																																				.	.	.	.	.	.	.					.																			.
Template Sequence		.	D	L	.	I	G	V	R	A	F	P	K	F	V	D	W	S	K	D	R	E	D	Q	V	L	K	S	F	A	K	Y	S	P	V	P	V	I	N	M	.	.	.	.	.	.	.	E	T	I	T	.	H	P	C	Q	E	L	A	H	A	L	A	L	Q	E	H	F	G	T	.	P	D	L	R	G	K	K	Y	V	L
Template Known Secondary structure		.	S		.									S	S						T	T												S	S					S	.	.	.	.	.	.	.	S	S	S		.																	T	S	.	S			T	T
Template Predicted Secondary structure		.			.																																				.	.	.	.	.	.	.					.																			.
Template SS confidence
			107	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.
		366	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		V	D	D	S	I	.	.	.	V	R	G	T	T	S	E	Q	I	I	E	M	A	R	E	A	G	A	K	K	V	Y	L	A	S	A	A	P	E	I	R	F	P
Query Conservation							.	.	.
Alig confidence							.	.	.																		.	.	.
Template Conservation																											.	.	.
Template Sequence		T	W	T	Y	H	P	K	P	L	N	T	A	V	A	N	S	A	L	T	I	A	T	R	M	G	.	.	.	M	D	V	T	L	L	C	P	T	P	D	Y	I
Template Known Secondary structure							S	S				S													T	T	.	.	.								S	S	G	G	G
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions