Job Description P0AG16 Confidence 99.90% Date Thu Jan 5 11:27:50 GMT 2012 Rank 21 Aligned Residues 201 % Identity 18% Template c1o57A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis Resolution 2.20 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																	.																		.	.
Query SS confidence																																	.																		.	.
Query Sequence		N	G	I	R	P	L	V	L	G	K	R	D	I	D	E	N	R	T	E	Y	M	V	A	S	E	S	V	A	L	D	T	.	L	G	F	D	F	L	R	D	V	A	P	G	E	A	I	Y	I	.	.	T	E	E	G	Q	L	F	T	R	Q	C	A	D	N	P	V	S	N	P	C	L	F	E	Y	V	Y	F	A	R
Query Conservation																																	.																		.	.
Alig confidence														.	.	.	.	.															.																		.	.
Template Conservation														.	.	.	.	.
Template Sequence		H	P	H	E	L	I	P	L	T	F	F	S	.	.	.	.	.	E	R	Y	E	S	A	K	S	S	I	S	E	D	L	T	I	I	K	Q	T	F	E	Q	Q	G	I	G	T	L	L	T	V	P	G	A	A	G	G	V	K	Y	I	P	K	M	K	Q	A	E	A	E	E	F	V	Q	T	L	G	Q	S	L	A	N
Template Known Secondary structure		S	T	T			B							.	.	.	.	.			T	T																				T	T	S								S	T	T																										T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		P	D	S	F	I	D	K	I	S	V	Y	S	A	R	V	.	.	.	.	N	M	G	T	K	L	G	E	K	I	A	R	E	W	E	D	L	D	I	D	V	V	I	P	I	P	E	T	S	C	D	I	A	L	E	I	A	R	I	L	G	K	P	Y	R	Q	G	F	V	K	N	R	Y	V	G	R	T	F	I	M	P
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		P	E	R	I	L	P	G	G	Y	V	Y	L	T	D	I	L	G	K	P	S	V	L	S	K	V	G	K	L	F	A	S	V	F	A	E	R	E	I	D	V	V	M	T	V	A	T	K	G	I	P	L	A	Y	A	A	A	S	Y	L	N	V	P	V	V	I	V	R	K	D	G	S	T	V	S	I	N	Y	V	S	G
Template Known Secondary structure		G	G	G			T	T	T					T	T	T	T	T																T	T	T	S			S						T	T	T	T												T							B													S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	Q	L	R	R	K	S	V	R	R	K	L	N	A	N	R	A	E	F	R	D	K	N	V	L	L	V	D	D	S	I	V	R	G	T	T	S	E	Q	I	I	E	M	A	R	E	A	G	A	K	K	V	Y	L	A	S
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		S	S	N	.	.	.	.	R	I	Q	T	M	S	L	A	K	R	S	M	K	T	G	S	N	V	L	I	I	D	D	F	M	K	A	G	G	T	I	N	G	M	I	N	L	L	D	E	F	N	A	N	V	A	G	I	G	V
Template Known Secondary structure		S			.	.	.	.	S								G	G	G	S		T	T											S	S	S										T	G	G	G	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		179	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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