Job Description P0AG16 Confidence 62.61% Date Thu Jan 5 11:27:50 GMT 2012 Rank 162 Aligned Residues 143 % Identity 19% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.										.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		E	G	Q	L	F	T	R	Q	C	A	D	N	P	V	S	N	P	C	L	F	E	.	.	.	.	.	.	.	.	.	Y	V	Y	F	A	R	P	D	S	F	I	D	K	I	S	V	Y	S	A	R	V	N	M	G	T	K	L	G	E	K	I	A	R	E	W	E	D	L	D	I	D	V	V	I	P	I	P	E	T	S
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																.	.												.	.	.	.	.	.	.						.
Template Conservation																																															.	.												.	.	.	.	.	.	.						.
Template Sequence		K	G	K	I	L	A	T	L	F	F	E	P	S	T	R	T	R	L	S	F	E	S	A	M	H	R	L	G	G	A	V	I	G	F	A	E	A	S	T	S	S	V	K	K	G	.	.	E	S	L	R	D	T	I	K	T	V	E	.	.	.	.	.	.	.	Q	Y	C	D	V	.	I	V	I	R	H	P	K	E	G
Template Known Secondary structure		T	T								S	S			S													T	T							S		G	G	G	S	G	G	G	G	T	.	.											T	.	.	.	.	.	.	.	T	T		S		.						S	S	T	T
Template Predicted Secondary structure																																															.	.												.	.	.	.	.	.	.						.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.		.	.	.	.	.	.	110	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	I	A	L	E	I	A	R	I	L	G	K	P	Y	R	Q	G	F	V	K	N	R	Y	V	G	R	T	F	I	M	P	G	Q	Q	L	R	R	K	S	V	R	R	K	L	N	A	N	R	A	E	F	R	D	K	N	V	L	L	V	D	D	S	I	V	R	G	T	T	S	E	Q	I	I	E	M	A	R	E	A
Query Conservation
Alig confidence		.	.																					.	.	.	.	.	.														.	.	.																			.
Template Conservation		.	.																					.	.	.	.	.	.														.	.	.																			.
Template Sequence		.	.	A	A	R	L	A	A	E	V	A	E	V	P	V	I	N	A	G	D	G	S	.	.	.	.	.	.	N	Q	H	P	T	Q	T	L	L	D	L	Y	T	.	.	.	I	K	K	E	F	G	R	I	D	G	L	K	I	G	L	L	G	D	.	L	K	Y	G	R	T	V	H	S	L	A	E	A	L	T	F	Y
Template Known Secondary structure		.	.								T		S	S								T	T	.	.	.	.	.	.	S													.	.	.					S	S		S	S	S							S		.	T	T	T											G	G	G	S
Template Predicted Secondary structure		.	.																					.	.	.	.	.	.														.	.	.																			.
Template SS confidence
				113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	K	K	V	Y	L	A	S	A	A	P	E	I	R	F	P
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		D	V	.	.	.	E	L	Y	L	I	S	P	E	L	L	R	M
Template Known Secondary structure				.	.	.								G	G	G
Template Predicted Secondary structure				.	.	.
Template SS confidence
		181	.				.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions