Job Description P0AG16 Confidence 100.00% Date Thu Jan 5 11:27:50 GMT 2012 Rank 2 Aligned Residues 459 % Identity 41% Template c1gph1_ PDB info PDB header:transferase(glutamine amidotransferase) Chain: 1: PDB Molecule:glutamine phosphoribosyl-pyrophosphate amidotransferase; PDBTitle: structure of the allosteric regulatory enzyme of purine biosynthesis Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	I	V	G	I	A	G	V	M	P	V	N	Q	S	I	Y	D	A	L	T	V	L	Q	H	R	G	Q	D	A	A	G	I	I	T	I	D	A	N	N	C	F	R	L	R	K	A	N	G	L	V	S	D	V	F	E	A	R	H	M	Q	R	L	Q	G	N	M	G	I	G	H	V	R	Y	P	T	A	G	S	S
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		C	G	V	F	G	I	W	G	H	E	E	A	P	Q	I	T	Y	Y	G	L	H	S	L	Q	H	R	G	Q	E	G	A	G	I	V	A	T	D	G	E	K	.	L	T	A	H	K	G	Q	G	L	I	T	E	V	F	Q	N	G	E	L	S	K	V	K	G	K	G	A	I	G	H	V	R	Y	A	T	A	G	G	G
Template Known Secondary structure									S		T	T											T	T	G	G	G		S	S									S	S		.							S	S						T		S	S	S	T	T	T				S										S	S	S		B
Template Predicted Secondary structure																																										.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		S	A	S	E	A	Q	P	F	Y	V	N	S	.	.	P	Y	G	I	T	L	A	H	N	G	N	L	T	N	A	H	E	L	R	K	K	L	F	E	E	K	R	R	H	I	N	T	T	S	D	S	E	I	L	L	N	I	F	A	S	E	L	D	N	F	R	H	Y	P	L	E	A	D	N	I	F	A	A	I	A	A
Query Conservation														.	.
Alig confidence														.	.																							.																								.	.	.	.	.	.	.	.	.
Template Conservation																																						.																								.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	E	N	V	Q	P	L	L	F	R	S	Q	N	N	G	S	L	A	L	A	H	N	G	N	L	V	N	A	T	Q	L	K	Q	Q	L	.	E	N	Q	G	S	I	F	Q	T	S	S	D	T	E	V	L	A	H	L	I	K	R	S	.	.	.	.	.	.	.	.	.	G	H	F	T	L	K	D	Q	I	K	N
Template Known Secondary structure			G	G	G	S	S							T	T	T												T	T									.			T	T				S	S													T		.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																						.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	R	L	I	R	G	A	Y	A	C	V	A	M	I	I	G	H	G	M	V	A	F	R	D	P	N	G	I	R	P	L	V	L	G	K	R	D	I	D	E	N	R	T	E	Y	M	V	A	S	E	S	V	A	L	D	T	L	G	F	D	F	L	R	D	V	A	P	G	E	A	I	Y	I	T	E	E	G	Q	L
Query Conservation
Alig confidence																.																								.	.	.	.	.																																				.
Template Conservation																.																								.	.	.	.	.																																				.
Template Sequence		S	L	S	M	L	K	G	A	Y	A	F	L	I	M	.	T	E	T	E	M	I	V	A	L	D	P	N	G	L	R	P	L	S	I	G	M	M	G	.	.	.	.	.	D	A	Y	V	V	A	S	E	T	C	A	F	D	V	V	G	A	T	Y	L	R	E	V	E	P	G	E	M	L	I	I	N	D	E	G	.	M
Template Known Secondary structure				T	T											.		S	S								T	T			S								T	.	.	.	.	.	T						S	S	T							T									T	T							T	T		.
Template Predicted Secondary structure																.																								.	.	.	.	.																																				.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	R	Q	C	A	D	N	P	V	S	N	P	C	L	F	E	Y	V	Y	F	A	R	P	D	S	F	I	D	K	I	S	V	Y	S	A	R	V	N	M	G	T	K	L	G	E	K	I	A	R	E	W	E	D	L	D	I	D	V	V	I	P	I	P	E	T	S	C	D	I	A	L	E	I	A	R	I	L	G	K
Query Conservation
Alig confidence																																																	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		K	S	E	R	F	S	M	N	I	N	R	S	I	C	S	M	E	Y	I	Y	F	S	R	P	D	S	N	I	D	G	I	N	V	H	S	A	R	K	N	L	G	K	M	L	A	Q	E	.	.	.	.	.	S	A	V	E	A	D	V	V	T	G	V	P	D	S	S	I	S	A	A	I	G	Y	A	E	A	T	G	I
Template Known Secondary structure						S															T	T	S		T	T				T	T																		.	.	.	.	.						S						T	T	T	T												T
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	R	Q	G	F	V	K	N	R	Y	V	G	R	T	F	I	M	P	G	Q	Q	L	R	R	K	S	V	R	R	K	L	N	A	N	R	A	E	F	R	D	K	N	V	L	L	V	D	D	S	I	V	R	G	T	T	S	E	Q	I	I	E	M	A	R	E	A	G	A	K	K	V	Y	L	A	S	A	A	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	E	L	G	L	I	K	N	R	Y	V	G	R	T	F	I	Q	P	S	Q	A	L	R	E	Q	G	V	R	M	K	L	S	A	V	R	G	V	V	E	G	K	R	V	V	M	V	D	D	S	I	V	R	G	T	T	S	R	R	I	V	T	M	L	R	E	A	G	A	T	E	V	H	V	K	I	S	S	P	P
Template Known Secondary structure			B								T	T		S	T	T												T				S									T	T								S			S	S	S													T	T		S							S	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		I	R	F	P	N	V	Y	G	I	D	M	P	S	A	T	E	L	I	A	H	G	R	E	V	D	E	I	R	Q	I	I	G	A	D	G	L	I	F	Q	D	L	N	D	L	I	D	A	V	R	A	E	N	P	D	I	Q	.	Q	F	E	C	S	V	F	N	G	V	Y	V	T	K	D	V	D	Q	G	Y	L	D	F
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		I	A	H	P	C	F	Y	G	I	D	T	S	T	H	E	E	L	I	A	S	S	H	S	V	D	E	I	R	Q	E	I	G	A	D	T	L	S	F	L	S	V	E	G	L	L	K	G	I	G	R	K	Y	D	D	S	N	C	G	Q	C	L	A	C	F	T	G	K	Y	P	T	E	I	Y	Q	D	T	V	L	P	H
Template Known Secondary structure				S				S		G	G	G			S	S																	T		S																			S	S	T	T	T	T								S			S	S				T	T				G	G
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		479	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	T	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	E	A	V
Template Known Secondary structure		G	G			B
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.