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Job DescriptionP0AG16
Confidence100.00%DateThu Jan 5 11:27:50 GMT 2012
Rank1Aligned Residues492
% Identity100%Templatec1ecjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSS
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Template Sequence  CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSS
Template Known Secondary structure 

SS

GGG

S
TTS
S




SS

BTTB
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  SASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATN
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Template Sequence  SASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATN
Template Known Secondary structure  SSS

S


SS
TT




SS
TT

SSS

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  RLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT
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Template Sequence  RLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT
Template Known Secondary structure 

TTT
TT

S

TTSSTTTT


TTTTS
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPY
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Template Sequence  RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPY
Template Known Secondary structure 
SSS




BTTS
TT
TTT
SS



TTTT

B
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  RQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIR
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Template Sequence  RQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIR
Template Known Secondary structure 



S







S


S



GGGTTT

S

SSSTT
SSSS



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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  FPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT
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Template Sequence  FPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT
Template Known Secondary structure  S


SS




TTTSTTTT

T
S

TT
TT



B



TT



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   401........410.........420.........430.........440.........450.........460.........470.........480
 
   482.......490...
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Query Sequence  LRNDDAKAVQRQ
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Template Conservation              
Template Sequence  LRNDDAKAVQRQ
Template Known Secondary structure 
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   481........490..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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