Job Description P0AG16 Confidence 100.00% Date Thu Jan 5 11:27:50 GMT 2012 Rank 11 Aligned Residues 244 % Identity 25% Template c1ct9D_ PDB info PDB header:ligase Chain: D: PDB Molecule:asparagine synthetase b; PDBTitle: crystal structure of asparagine synthetase b from2 escherichia coli Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		C	G	I	V	G	I	A	G	V	M	P	V	N	Q	S	.	.	.	.	I	Y	D	A	L	T	V	L	Q	H	R	G	Q	D	A	A	G	I	I	T	I	D	A	N	N	C	F	R	L	R	K	A	N	G	L	V	S	D	V	F	E	A	R	H	M	Q	R	L	Q	G	N	M	G	I	G	H	V	R	Y	P	T
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	I	F	G	V	F	D	I	K	T	D	A	V	E	L	R	K	K	A	L	E	L	S	R	L	M	R	H	R	G	P	D	W	S	G	I	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	N	A	I	L	A	H	E	R	L	S	I
Template Known Secondary structure									S			S															T	T	G	G	G			S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S										S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																													40	.	.	.	.	.	.	.	.	.	50	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	S	S	S	A	S	E	A	Q	P	F	Y	V	N	S	P	Y	G	I	T	L	A	H	N	G	N	L	T	N	A	H	E	L	R	K	K	L	F	E	E	K	R	R	H	I	N	T	T	S	D	S	E	I	L	L	N	I	F	A	S	E	L	D	N	F	R	H	Y	P	L	E	A	D	N	I	F	A	A	I
Query Conservation
Alig confidence							.	.							.																									.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.							.																									.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	V	N	A	.	.	G	A	Q	P	L	Y	.	N	Q	Q	K	T	H	V	L	A	V	N	G	E	I	Y	N	H	Q	A	L	R	A	E	Y	.	.	G	D	R	Y	Q	F	Q	T	G	S	D	C	E	V	I	L	A	L	Y	Q	E	K	G	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	T	T	T	.	.			S	S			.		S	S	S											T	T									.	.	T	T	T					S			T	T											T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.							.																									.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.			.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	A	T	N	R	L	I	R	G	A	Y	A	C	V	A	M	I	.	I	G	H	G	M	V	A	F	R	D	P	N	G	I	R	P	L	V	L	G	K	R	D	I	D	E	N	R	T	E	Y	M	V	A	S	E	S	V	A	L	D	T	L	G	F	D	F	L	R	D	V	A	P	G	E	A	I	Y	I	T	E	E
Query Conservation																			.
Alig confidence		.	.																.																								.	.	.	.																	.
Template Conservation		.	.																																								.	.	.	.																	.
Template Sequence		.	.	F	L	D	D	L	Q	G	M	F	A	F	A	L	Y	D	S	E	K	D	A	Y	L	I	G	R	D	H	L	G	I	I	P	L	Y	M	G	Y	D	E	.	.	.	.	H	G	Q	L	Y	V	A	S	E	M	K	A	L	V	P	V	.	C	R	T	I	K	E	F	P	A	G	S	Y	L	W	S	Q	D	G
Template Known Secondary structure		.	.	T	G	G	G												T	T	T	T								T	T		S	S								T	.	.	.	.	T							S	S	G	G	G	T	T	T	T	.		S							T	T					T	T	T	T
Template Predicted Secondary structure		.	.																																								.	.	.	.																	.
Template SS confidence
				113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.						.	.	.	.	.	.	310	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		G	Q	L	F	T	R	Q	C	A	D	N	P	V	S	N	P	C	L	F	E	Y	V	Y	F	A	R	P	D	S	F	I	D	K	I	S	V	Y	S	A	R	V	N	M	G	T	K	L	G	E	K	I	A	R	E	W	E	D	L	D	I	D	V	V	I	P	I	P	.	.	.	.	.	E	T	S	C	D	I	A	L
Query Conservation																																																																					.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.											.	.	.	.	.								.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.																							.
Template Sequence		E	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	Y	H	R	D	W	F	D	Y	D	A	V	K	D	N	V	T	D	K	N	E	L	R	Q	A	L	E	D	S	V	K	S	H	.	.	.	.	.	.	.	L	M	S	D	V	P	Y	G	V	L	L	S	G	G	L	D	S	S	I	I	S	A	.
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	S	G	G	G	T	T	T																			T	.	.	.	.	.	.	.	T			S	S								S	S									.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.																							.
Template SS confidence
		186	.	.														.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	R	I	L	G	K	P	Y	R
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	I	T	K	K	Y	A	A	Q	L	H
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			245	.	.	.	.	250	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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