Job Description P69856 Confidence 4.14% Date Thu Jan 5 12:12:14 GMT 2012 Rank 100 Aligned Residues 165 % Identity 13% Template d2pora_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.80

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		N	G	W	W	A	S	M	E	S	N	T	W	N	T	I	H	D	N	K	K	E	N	A	A	L	N	D	V	Q	V	E	V	N	Y	A	I	K	L	D	D	Q	W	T	V	R	P	G	M	L	T	H	F	S	S	N	G	T	.	.	.	.	R	Y	G	P	Y	V	K	L	S	W	D	A	T	K	D	L	N	F	G
Query Conservation																																																											.	.	.	.
Alig confidence												.	.	.	.	.																										.																	.	.	.	.
Template Conservation												.	.	.	.	.																										.
Template Sequence		G	A	F	S	V	A	A	S	M	S	.	.	.	.	.	D	G	K	V	G	E	T	S	E	D	D	A	Q	E	M	A	V	A	A	A	Y	T	F	G	N	.	Y	T	V	G	L	G	Y	E	K	I	D	S	P	D	T	A	L	M	A	D	M	E	Q	L	E	L	A	A	I	A	K	F	G	A	T	N	V	K	A
Template Known Secondary structure		T	T									.	.	.	.	.		S	B	S	T	T	S	S		B														T	T	.													S		T	T	T	S															T	T
Template Predicted Secondary structure												.	.	.	.	.																										.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		I	R	Y	R	Y	D	W	K	A	.	.	.	.	.	.	Y	R	Q	Q	D	L	S	G	D	M	S	R	D	N	V	H	R	W	D	G	Y	V	T	Y	H	I	N	S	D	F	T	F	A	W	Q	T	T	L	Y	S	K	Q	N	D	Y	R	Y	A	N	H	K	K	W	A	T	E	N	A	F	V	L	Q	Y	H	M
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																												.													.	.	.	.	.	.	.
Template Conservation																																												.													.	.	.	.	.	.	.
Template Sequence		Y	Y	A	D	G	E	L	D	R	D	F	A	R	A	V	F	D	L	T	P	V	A	A	A	A	T	A	V	D	H	K	A	Y	G	L	S	V	D	S	T	F	G	.	A	T	T	V	G	G	Y	V	Q	V	L	D	.	.	.	.	.	.	.	I	D	T	I	D	D	V	T	Y	Y	G	L	G	A	S	Y	D	L
Template Known Secondary structure																	T	T					S	S																			T	.	T												.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																												.													.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.								.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	D	I	T	P	Y	I	E	Y	D	Y	L	D	R	Q	G	V	Y	N	G	R	D	N	L	S	E	N	S	Y	R	I	G	V	S	F	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		G	G	G	A	S	I	V	G	G	I	A	D	N	D	L	P	N	.	.	.	.	.	.	.	.	S	D	M	V	A	D	L	G	V	K	F	K
Template Known Secondary structure			T	T												S	S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions