Job Description P69856 Confidence 95.87% Date Thu Jan 5 12:12:14 GMT 2012 Rank 16 Aligned Residues 170 % Identity 9% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		N	G	W	W	A	S	M	E	S	N	T	W	N	T	I	H	D	N	K	K	E	N	A	A	L	N	D	V	Q	V	E	V	N	Y	A	I	K	L	D	D	Q	W	T	V	R	P	G	M	L	T	H	F	S	S	N	G	T	R	.	.	.	.	Y	G	P	Y	V	K	L	S	W	D	A	T	K	D	L	N	F	G
Query Conservation																																																												.	.	.	.
Alig confidence																										.	.	.														.																		.	.	.	.														.
Template Conservation																										.	.	.														.																																			.
Template Sequence		G	G	F	N	A	G	F	G	Y	A	F	D	E	K	Q	T	I	G	T	A	D	S	V	G	.	.	.	R	Y	I	G	G	Y	V	A	Y	D	N	G	P	.	L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	.	A	K	L	S
Template Known Secondary structure		T	T											T	T			B	T	T	B	S	S	T	T	.	.	.												S	S	.															T	T																	S	S	.
Template Predicted Secondary structure																										.	.	.														.																																			.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Y	R	Y	D	W	K	A	Y	R	Q	Q	D	L	S	G	D	M	S	R	D	N	V	H	R	W	D	G	Y	V	T	Y	H	I	N	S	D	F	T	F	A	W	Q	T	T	L	Y	S	K	Q	N	D	Y	R	Y	A	N	H	K	K	W	A	T	E	N	A	F	V	L	Q	Y	H	M	T	P	D	I	T	P
Query Conservation
Alig confidence														.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		G	L	L	Q	Q	T	K	F	K	R	D	I	.	.	.	.	.	.	G	G	D	I	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	I	.	.	.	.	.	.	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L
Template Known Secondary structure												T	T	.	.	.	.	.	.	S																	T	T	T													G	G	G	.	.	.	.	.	.	T														S	S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.													.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	E	Y	D	Y	L	D	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	G	V	Y	N	G	R	D	N	L	S	E	N	S	Y	R	I	G	V	S	F	K
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A
Template Known Secondary structure												T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions