Job Description P69856 Confidence 78.01% Date Thu Jan 5 12:12:14 GMT 2012 Rank 36 Aligned Residues 214 % Identity 12% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		S	P	L	I	S	Q	A	A	T	L	D	V	R	G	.	.	.	G	Y	R	S	G	S	H	A	Y	E	T	R	L	K	V	S	E	G	W	Q	N	G	W	W	A	S	M	E	S	N	T	W	N	T	I	H	D	N	K	K	E	N	A	A	L	N	D	V	Q	V	E	V	N	Y	A	I	K	L	D	D	Q	W	T
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		L	R	V	I	A	Q	T	Q	Q	D	G	G	T	W	E	Q	G	G	V	E	G	K	M	R	G	S	T	Q	T	V	G	I	A	A	K	T	G	E	N	T	T	A	A	A	T	L	G	M	G	R	S	T	W	S	E	N	S	A	N	A	K	T	D	S	I	S	L	F	A	G	I	R	H	D	A	G	D	I	G	Y
Template Known Secondary structure																		S	S																				T	T																	T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.																		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																													.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																													.	.	.	.	.
Query Sequence		V	R	P	G	M	L	T	H	F	S	S	N	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	G	P	Y	V	K	L	S	W	D	A	T	K	D	.	L	N	F	G	I	R	Y	R	Y	D	W	K	A	Y	R	Q	Q	D	L	S	G	D	M	S	R	D	N	V	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																													.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																													.	.	.	.	.
Template Conservation
Template Sequence		L	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D	E	H	A	E	G	S	V	N	G	T	L	M	Q	L	G	A	L	G	G	V	N	V	P	T	G	D	L	T	V	E	G	G	L	R	Y	D	L	L	K	Q	D	A	F	A	E	K	G	S	A	L	G	W	S	G	N	S	L	T	E
Template Known Secondary structure																				S	S	S																																															S		T	T
Template Predicted Secondary structure
Template SS confidence
		899	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.
						151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																											.
Query SS confidence		.	.	.	.																											.
Query Sequence		.	.	.	.	H	R	W	D	G	Y	V	T	Y	H	I	N	S	D	F	T	F	A	W	Q	T	T	L	Y	S	K	.	Q	N	D	Y	R	Y	A	N	H	K	K	W	A	T	E	N	A	F	V	L	Q	Y	H	M	T	P	D	I	T	P	Y	I	E	Y	D	Y	L	D	R	Q	G	V	Y	N	G	R	D	N	L
Query Conservation		.	.	.	.																											.
Alig confidence		.	.	.	.																											.																																			.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.
Template Sequence		G	T	L	V	G	L	A	G	L	K	L	S	Q	P	L	S	D	K	A	V	L	F	A	T	A	G	V	E	R	D	L	N	G	R	D	Y	T	V	T	G	P	H	T	R	L	V	A	G	L	G	A	D	V	E	F	G	N	G	W	N	G	L	A	R	Y	.	.	.	.	.	.	.	S	Y	A	G	S	K	Q	Y
Template Known Secondary structure																	S	S	S													S	S																									T	T								.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Template SS confidence
		982	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.								.	.	.	1050	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	N	S	Y	R	I	G	V	S	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	H	S	G	R	V	G	V	G	Y	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1072	.	.	.	.	.	.	.	1080	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions