Job Description P69856 Confidence 6.88% Date Thu Jan 5 12:12:14 GMT 2012 Rank 65 Aligned Residues 129 % Identity 12% Template d1kmoa_ SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 2.00

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.											.
Predicted Secondary structure																																						.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Y	G	P	Y	V	K	L	S	W	D	A	T	K	D	L	N	F	G	I	R	Y	R	Y	D	W	K	A	Y	R	Q	Q	D	L	S	G	.	.	D	M	S	R	D	N	V	H	R	W	D	G	Y	V	T	Y	H	I	N	S	D	F	T	F	A	W	Q	T	T	L	Y	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																																						.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.																				.												.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.
Template Sequence		Q	A	R	Y	D	L	G	T	L	T	P	T	L	D	N	V	S	I	Y	A	S	Y	A	Y	V	N	A	E	I	R	E	K	G	D	T	Y	G	N	L	V	P	F	S	P	K	H	K	G	T	L	G	V	D	Y	K	P	G	.	N	W	T	F	N	L	N	S	D	F	Q	S	S	Q	F	A	D	N	A	N	T	V
Template Known Secondary structure							G	G	G	T		G	G	G	T	T																S	S	S	T	T	T	T		B		T	T			S												T	.	T													B		S	S	T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.		.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.													.																	.	.	.	.	.	.	.
Query SS confidence																												.	.	.													.																	.	.	.	.	.	.	.
Query Sequence		K	Q	N	D	Y	R	Y	A	N	H	K	K	W	A	T	E	N	A	F	V	L	Q	Y	H	M	T	.	.	.	P	D	I	T	P	Y	I	E	Y	D	Y	L	.	D	R	Q	G	V	Y	N	G	R	D	N	L	S	E	N	S	.	.	.	.	.	.	.	Y	R	I	G	V	S	F	K
Query Conservation																												.	.	.													.																	.	.	.	.	.	.	.
Alig confidence																												.	.	.													.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	S	A	D	G	S	T	G	R	I	P	G	F	M	L	W	G	A	R	V	A	Y	D	F	G	P	Q	M	A	D	L	N	L	A	F	G	V	K	N	I	F	D	Q	D	Y	F	I	R	S	Y	D	D	N	N	K	G	I	Y	A	G	Q	P	R	T	L	Y	M	Q	G	S	L	K
Template Known Secondary structure		S			T	T	S	S	S	S		B																T	T	T	T										S	T	T										S	S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions