Job Description P69856 Confidence 74.70% Date Thu Jan 5 12:12:14 GMT 2012 Rank 37 Aligned Residues 155 % Identity 14% Template d1af6a_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

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		80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.												.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure								.																				.	.	.	.	.	.	.	.	.	.	.																				.																					.	.	.
Query SS confidence								.																				.	.	.	.	.	.	.	.	.	.	.																				.																					.	.	.
Query Sequence		V	E	V	N	Y	A	.	I	K	L	D	D	Q	W	T	V	R	P	G	M	L	T	H	F	S	S	.	.	.	.	.	.	.	.	.	.	.	N	G	T	R	Y	G	P	Y	V	K	L	S	W	D	A	T	K	D	L	.	N	F	G	I	R	Y	R	Y	D	W	K	A	Y	R	Q	Q	D	L	S	G	.	.	.
Query Conservation								.																				.	.	.	.	.	.	.	.	.	.	.																				.																					.	.	.
Alig confidence								.																				.	.	.	.	.	.	.	.	.	.	.																				.																					.	.	.
Template Conservation
Template Sequence		F	D	V	R	L	A	Q	M	E	I	N	P	G	G	T	L	E	L	G	V	D	Y	G	R	A	N	L	R	D	N	Y	R	L	V	D	G	A	S	K	D	G	W	L	F	T	A	E	H	T	Q	S	V	L	K	G	F	N	K	F	V	V	Q	Y	A	T	D	S	M	T	S	Q	G	K	G	L	S	Q	G	S	G
Template Known Secondary structure													T	T																T	T		B			T	T																	T	T												G	G	G	T	T	T		S	S					S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
													144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	D	M	S	R	D	N	V	H	R	W	D	G	Y	V	T	Y	H	I	N	S	D	F	T	F	A	W	Q	T	T	L	Y	S	K	Q	N	D	Y	R	Y	A	N	H	K	K	W	A	T	E	N	A	F	V	L	Q	Y	H	M	T	P	D	I	T	P	Y	I	E	Y	D	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation																																															.	.	.
Template Sequence		V	A	F	D	N	E	K	F	A	Y	N	I	N	N	N	G	H	M	L	R	I	L	D	H	G	A	I	S	M	G	D	N	W	D	M	M	Y	V	G	M	Y	Q	D	I	N	.	.	.	W	D	N	D	N	G	T	K	W	W	T	V	G	I	R	P	M	Y	K	W	T	P	I	M	S	T	V	M	E	I	G	Y
Template Known Secondary structure						T	T																								T	T	T														.	.	.		T	T	S																S	S	S	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	Q	G	V	Y	N	G	R	D	N	L	S	E	N	S	Y	R	I	G	V	S	F	K	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	N	V	E	S	Q	R	T	G	D	K	N	N	Q	Y	K	I	T	L	A	Q	Q	W	Q	A
Template Known Secondary structure		.						T	T	T																	S
Template Predicted Secondary structure		.
Template SS confidence
			329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions