Return to main results Retrieve Phyre Job Id

Job DescriptionP69856
Confidence4.41%DateThu Jan 5 12:12:14 GMT 2012
Rank90Aligned Residues62
% Identity8%Templatec3jt0B_
PDB info PDB header:structural proteinChain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.......
Predicted Secondary structure 



























Query SS confidence 
































































Query Sequence  LKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGT
Query Conservation 


 
   

 
   
        
           
    
  
  
   
 

         
Alig confidence 











..



.













































Template Conservation 
 
 
 
  
  ..
 
 .
       
 

 
          
 

    
 

  



    
Template Sequence  VCIEEIDVDGKF. . IRLK. NTSEQDQPXGGWEXIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANA
Template Known Secondary structure 
TTSS...
SSS

TT
TT

TT

TT

TTS
Template Predicted Secondary structure 




...

























Template SS confidence 
































































   28.30......... 40... ......50.........60.........70.........80.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions